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| import numpy as np | |
| fragments = np.load("fragments_clust.npy") | |
| redun = np.load("redundancy-masks/1.0-seqclust-50.npy").astype(bool) | |
| fragments = fragments[redun] | |
| fragments_aa = np.array([f for f in fragments if f["motif"] == b"AAA"]) | |
| clus = [f for f in fragments_aa if f["clust1.0"] == 700] | |
| print(clus) |
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