Stephen Larson slarson
slarson
/ Creating RDF from OpenWorm Semantic Database via Python.ipynb
Last active
May 4, 2016 16:04
iPython notebook example showing how to create simple RDF from the OpenWorm Semantic Database via Python
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slarson
/ Access OpenWorm Semantic Database via Python (1).ipynb
Created
September 24, 2013 23:57
Access OpenWorm Semantic Database via Python
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slarson
/ gist:6679778
Created
September 24, 2013 02:50
Google App Script for calculating free time across multiple Google calendars. Writes results to a Google spreadsheet so they can be plotted.
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| function startCounting() { | |
| // create 5min Trigger | |
| ScriptApp.newTrigger("countEvents").timeBased().everyMinutes(5).create(); | |
| // create end Trigger | |
| //var end_date_trigger = new Date(end_date_array[2], end_date_array[1] - 1, end_date_array[0], 10); | |
| //ScriptApp.newTrigger("stopCounting").timeBased().at(end_date_trigger).create(); | |
| } | |
| /* remove all triggers when it comes to the end of a Sprint */ |
slarson
/ gist:6599881
Created
September 17, 2013 20:09
iPython Notebook that walks through examples of working with RDFLib and NeuroLex.org
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| { | |
| "metadata": { | |
| "name": "Getting started with Python - RDF - NeuroLex" | |
| }, | |
| "nbformat": 3, | |
| "nbformat_minor": 0, | |
| "worksheets": [ | |
| { | |
| "cells": [ | |
| { |
slarson
/ TrelloBurndownGoogleAppsScript
Created
September 13, 2013 01:58
Trello Burndown Google Apps script modified from http://echobehind.wordpress.com/2012/06/28/create-your-own-burndown-chart-using-trello-api-and-google-apps-script/
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| function trelloFetch(url) { | |
| var key = "your_trello_API_key", | |
| api_endpoint = "https://api.trello.com/1", | |
| member_token = "your_member_TOKEN"; | |
| var completeUrl = api_endpoint + url + "?key=" + key + "&token=" + member_token; | |
| var jsonData = UrlFetchApp.fetch(completeUrl); | |
| var object = Utilities.jsonParse(jsonData.getContentText()); |
slarson
/ Synapse positions work 8-22.ipynb
Created
August 22, 2013 23:43
iPython Notebook file for work done on synapse positions, 8/22
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slarson
/ Synapse position algorithm test
Last active
December 19, 2015 07:29
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| { | |
| "metadata": { | |
| "name": "Synapse Position Algorithm" | |
| }, | |
| "nbformat": 3, | |
| "nbformat_minor": 0, | |
| "worksheets": [ | |
| { | |
| "cells": [ | |
| { |
slarson
/ gist:5820077
Last active
December 18, 2015 17:39
Loading WormBehavior database file in Python without Matlab (iPython Notebook)
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| { | |
| "metadata": { | |
| "name": "Playing with WormBehavior Database" | |
| }, | |
| "nbformat": 3, | |
| "nbformat_minor": 0, | |
| "worksheets": [ | |
| { | |
| "cells": [ | |
| { |
slarson
/ worm2nx.py
Created
June 14, 2013 06:58
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| """ | |
| worm2nx.py | |
| Simple script for turning connectome tables into NetworkX graphs. | |
| Note that the tables were extracted manually from the connectivity spreadsheet | |
| of the c. elegans and should accompany this script. | |
| Author: Pedro Tabacof (tabacof at gmail dot com) | |
| Stephen Larson ([email protected]) | |
| License: Public Domain |
slarson
/ celegans-networkX-ipythonnb
Last active
September 7, 2017 03:53
Working with the C. Elegans connectome data and the NetworkX library in iPython Notebook
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| { | |
| "metadata": { | |
| "name": "NetworkX C. Elegans Connectome" | |
| }, | |
| "nbformat": 3, | |
| "nbformat_minor": 0, | |
| "worksheets": [ | |
| { | |
| "cells": [ | |
| { |