Sam Minot sminot
sminot
/ fetch_ocx_analyses.R
Last active
August 22, 2016 23:55
— forked from boydgreenfield/fetch_ocx_analyses.R
Sample R script for generating a CSV with One Codex analysis results, one column per sample
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| #!/usr/local/bin/Rscript | |
| # Copyright Reference Genomics, Inc. 2016 | |
| # Released under the MIT License | |
| # | |
| # Script for fetching analysis results from the One Codex API (v0) | |
| # See https://docs.onecodex.com for full documentation on the REST API | |
| # | |
| # Script can be run from the command line with: | |
| # `Rscript fetch_ocx_analyses.R <API_KEY> <FILE> [-d DB] [-b BEGINNING_DATE -e ENDING_DATE]` |