Created
April 27, 2022 11:14
-
-
Save strengejacke/862f9293b708baf6e06242e868ac3182 to your computer and use it in GitHub Desktop.
comparisons vs contrasts
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
library(easystats) | |
#> # Attaching packages: easystats 0.4.3 | |
#> ✔ insight 0.17.0.6 ✔ datawizard 0.4.0.14 | |
#> ✔ bayestestR 0.12.1 ✔ performance 0.9.0.3 | |
#> ✔ parameters 0.17.0.9 ✔ effectsize 0.6.0.7 | |
#> ✔ modelbased 0.8.0 ✔ correlation 0.8.0.1 | |
#> ✔ see 0.7.0.2 ✔ report 0.5.1.1 | |
library(emmeans) | |
library(marginaleffects) | |
data(efc, package = "datawizard") | |
efc <- data_to_factor(efc, select = c("c172code", "e16sex"), append = TRUE) | |
efc$c172code_f <- data_recode(efc$c172code_f, list(`low` = 1:2, `high` = 3)) | |
m <- lm(neg_c_7 ~ c172code_f * e16sex_f, data = efc) | |
emmeans(m, c("c172code_f", "e16sex_f")) |> | |
contrast(method = "pairwise") |> | |
model_parameters() | |
#> contrast | Coefficient | SE | 95% CI | t(83) | p | |
#> --------------------------------------------------------------------- | |
#> high 1 - low 1 | 0.53 | 2.27 | [-3.99, 5.04] | 0.23 | > .999 | |
#> high 1 - high 2 | 0.85 | 2.55 | [-4.22, 5.92] | 0.33 | > .999 | |
#> high 1 - low 2 | 2.83 | 2.27 | [-1.68, 7.34] | 1.25 | 0.811 | |
#> low 1 - high 2 | 0.32 | 1.54 | [-2.74, 3.38] | 0.21 | > .999 | |
#> low 1 - low 2 | 2.30 | 1.01 | [ 0.30, 4.31] | 2.29 | 0.212 | |
#> high 2 - low 2 | 1.98 | 1.53 | [-1.07, 5.03] | 1.29 | 0.789 | |
#> | |
#> p-value adjustment method: Tukey | |
comparisons( | |
m, | |
c("c172code_f", "e16sex_f"), | |
newdata = get_datagrid(m, at = c("c172code_f", "e16sex_f")), | |
# same as: datagrid(model = m, c172code_f = c("low", "high"), e16sex_f = c(1, 2)), | |
contrast_factor = "pairwise" | |
) | |
#> rowid term contrast comparison std.error c172code_f e16sex_f | |
#> 1: 1 c172code_f low - high -0.5277778 2.269220 high 1 | |
#> 2: 2 c172code_f low - high -0.5277778 2.269220 low 1 | |
#> 3: 3 c172code_f low - high -1.9810811 1.534532 high 2 | |
#> 4: 4 c172code_f low - high -1.9810811 1.534532 low 2 | |
#> 5: 1 e16sex_f 2 - 1 -0.8500000 2.547193 high 1 | |
#> 6: 2 e16sex_f 2 - 1 -2.3033033 1.007946 low 1 | |
#> 7: 3 e16sex_f 2 - 1 -0.8500000 2.547193 high 2 | |
#> 8: 4 e16sex_f 2 - 1 -2.3033033 1.007946 low 2 |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment