Skip to content

Instantly share code, notes, and snippets.

@swantzter
Last active December 22, 2021 11:26
Show Gist options
  • Save swantzter/042f0d15a4090dce14e9e6075284e28a to your computer and use it in GitHub Desktop.
Save swantzter/042f0d15a4090dce14e9e6075284e28a to your computer and use it in GitHub Desktop.
Replace codecogs images with mathjax-able html
/**
* ____ _
* ___ ___ __ _ ___|___ \ (_) __ ___ __
* / __/ _ \ / _` / __| __) || |/ _` \ \/ /
* | (_| (_) | (_| \__ \/ __/ | | (_| |> <
* \___\___/ \__, |___/_____|/ |\__,_/_/\_\
* |___/ |__/
*
* It is way better to actually replace the images as this will greatly increase
* the pages loadtime as it'll first load all the images from codecogs (can't
* stop that from happening) and then replace and render them. The final
* equations won't be processed until 10 seconds after initial load.
* However this is a viable temporary plug'n'play solution for testing MathJax
* on a site that uses codecogs.
*
* Copyright 2017 Svante Bengtson
* Released under the MIT licence
*
* Permission is hereby granted, free of charge, to any person obtaining a copy
* of this software and associated documentation files (the "Software"), to deal
* in the Software without restriction, including without limitation the rights
* to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
* copies of the Software, and to permit persons to whom the Software is
* furnished to do so, subject to the following conditions:
*
* The above copyright notice and this permission notice shall be included in
* all copies or substantial portions of the Software.
*
* THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
* IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
* FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
* AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
* LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
* OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
* SOFTWARE.
*/
/* global MathJax */ // define for standard js
// Used to check if the image is from codecogs and thus should be replaced
// precompile the regex for improved performance
var regEx = /latex\.codecogs\.com/gi
function replaceEls () {
// Get all image elements, and transform the HTMLcollection into an Array
var imgEls = [].slice.call(document.getElementsByTagName('img'))
// Loop through all the images
for (var i = 0; i < imgEls.length; i++) {
// if it isn't from codecogs, skip the element
if (!regEx.test(imgEls[i].src)) { continue }
console.log('[cogs2jax] Processing Equation', imgEls[i].alt)
// Make a new span element to place the equation in, alt text used for performance
var newEl = document.createElement('span')
// add surronding \( and \) around the math to make MathJax recognice it
newEl.innerHTML = '\\(' + imgEls[i].alt + '\\)'
// Replace the image with the span
imgEls[i].parentNode.replaceChild(newEl, imgEls[i])
}
if (typeof MathJax !== 'undefined') {
// Render everything with MatJax, used in the 10s delayed extra run
MathJax.Hub.Typeset()
}
return true
}
replaceEls()
/*
* double check that ALL img's have been checked
* once we are (pretty) sure everything has loaded, chrome for instance
* doesn't catch all the first run
*/
setTimeout(replaceEls, 10000)
/* Source https://github.com/svbeon/MathJax-mhchem/blob/master/unpacked/mhchem.js */
/* -*- Mode: Javascript; indent-tabs-mode:nil; js-indent-level: 2 -*- */
/* vim: set ts=2 et sw=2 tw=80: */
/*************************************************************
*
* MathJax/extensions/TeX/mhchem.js
*
* Implements the \ce command for handling chemical formulas
* from the mhchem LaTeX package.
*
* ---------------------------------------------------------------------
*
* Copyright (c) 2011-2015 The MathJax Consortium
* Copyright (c) 2015-2017 Martin Hensel
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
//
// Coding Style
// - use '' for identifiers that can by minified/uglified
// - use "" for strings that need to stay untouched
MathJax.Extension['TeX/mhchem'] = {
version: '3.2.0'
}
MathJax.Hub.Register.StartupHook('TeX Jax Ready', function () {
var TEX = MathJax.InputJax.TeX
//
// This is the main class for handing the \ce and related commands.
// Its main method is Parse() which takes the argument to \ce and
// returns the corresponding TeX string.
//
var CE = MathJax.Object.Subclass({
string: '', // the \ce string being parsed
//
// Store the string when a CE object is created
//
Init: function (string) { this.string = string },
//
// This converts the CE string to a TeX string.
//
Parse: function (stateMachine) {
try {
return '{\\sf ' + texify.go(mhchemParser.go(this.string, stateMachine)) + '}'
} catch (ex) {
TEX.Error(ex)
}
}
})
//
// Core parser for mhchem syntax (recursive)
//
var mhchemParser = {}
//
// Parses mchem \ce syntax
//
// Call like
// go("H2O");
//
// Looks through mhchemParser.transitions, to execute a matching action
// (recursive)
//
mhchemParser.go = function (input, stateMachine) {
if (!input) { return input }
if (stateMachine === undefined) { stateMachine = 'ce' }
var state = '0'
//
// String buffers for parsing:
//
// buffer.a == amount
// buffer.o == element
// buffer.b == left-side superscript
// buffer.p == left-side subscript
// buffer.q == right-side subscript
// buffer.d == right-side superscript
//
// buffer.r == arrow
// buffer.rdt == arrow, script above, type
// buffer.rd == arrow, script above, content
// buffer.rqt == arrow, script below, type
// buffer.rq == arrow, script below, content
//
// buffer.text
// buffer.rm
// etc.
//
// buffer.parenthesisLevel == int, starting at 0
// buffer.sb == bool, space before
// buffer.beginsWithBond == bool
//
// These letters are also used as state names.
//
// Other states:
// 0 == begin of main part (arrow/operator unlikely)
// 1 == next entity
// 2 == next entity (arrow/operator unlikely)
// 3 == next atom
// c == macro
//
var buffer = {}
buffer['parenthesisLevel'] = 0
input = input.replace(/[\u2212\u2013\u2014\u2010]/g, '-')
input = input.replace(/[\u2026]/g, '...')
var lastInput, watchdog
var output = []
while (true) {
if (lastInput !== input) {
watchdog = 10
lastInput = input
} else {
watchdog--
}
//
// Look for matching string in transition table
//
var machine = mhchemParser.stateMachines[stateMachine]
var iTmax = machine.transitions.length
iterateTransitions:
for (var iT = 0; iT < iTmax; iT++) { // Surprisingly, looping is not slower than another data structure with direct lookups. 635d910e-0a6d-45b4-8d38-2f98ac9d9a94
var t = machine.transitions[iT]
var tasks = t.actions[state] || t.actions['*'] || null
if (tasks) { // testing tasks (actions) before matches is slightly faster
var matches = mhchemParser.matchh(t.matchh, input)
if (matches) {
//
// Execute action
//
var actions = mhchemParser.concatNotUndefined([], tasks.action)
var iAmax = actions.length
for (var iA = 0; iA < iAmax; iA++) {
var a = actions[iA]
var o
var option
if (a.type) {
option = a.option
a = a.type
}
if (typeof a === 'string') {
if (machine.actions[a]) {
o = machine.actions[a](buffer, matches.matchh, option)
} else if (mhchemParser.actions[a]) {
o = mhchemParser.actions[a](buffer, matches.matchh, option)
} else {
throw ['MhchemBugA', 'mhchem bug A. Please report. (' + a + ')'] // Trying to use non-existing action
}
} else if (typeof a === 'function') {
o = a(buffer, matches.matchh)
}
output = mhchemParser.concatNotUndefined(output, o)
}
//
// Set next state,
// Shorten input,
// Continue with next character
// (= apply only one transition per position)
//
state = tasks.nextState || state
if (input.length > 0) {
if (!tasks.revisit) {
input = matches.remainder
}
if (!tasks.toContinue) {
break iterateTransitions
}
} else {
return output
}
}
}
}
//
// Prevent infinite loop
//
if (watchdog <= 0) {
throw ['MhchemBugU', 'mhchem bug U. Please report.'] // Unexpected character
}
}
}
mhchemParser.concatNotUndefined = function (a, b) {
if (!b) { return a }
if (!a) { return [].concat(b) }
return a.concat(b)
}
//
// Matching patterns
// either regexps or function that return null or {match:"a", remainder:"bc"}
//
mhchemParser.patterns = {
// property names must not look like integers ("2") for correct property traversal order, later on
'empty': /^$/,
'else': /^./,
'else2': /^./,
'space': /^\s/,
'space A': /^\s(?=[A-Z\\$])/,
'a-z': /^[a-z]/,
'x': /^x/,
'x$': /^x$/,
'i$': /^i$/,
'letters': /^(?:[a-zA-Z\u03B1-\u03C9\u0391-\u03A9?@]|(?:\\(?:alpha|beta|gamma|delta|epsilon|zeta|eta|theta|iota|kappa|lambda|mu|nu|xi|omicron|pi|rho|sigma|tau|upsilon|phi|chi|psi|omega|Gamma|Delta|Theta|Lambda|Xi|Pi|Sigma|Upsilon|Phi|Psi|Omega)(?:\s+|\{\}|(?![a-zA-Z]))))+/,
'\\greek': /^\\(?:alpha|beta|gamma|delta|epsilon|zeta|eta|theta|iota|kappa|lambda|mu|nu|xi|omicron|pi|rho|sigma|tau|upsilon|phi|chi|psi|omega|Gamma|Delta|Theta|Lambda|Xi|Pi|Sigma|Upsilon|Phi|Psi|Omega)(?:\s+|\{\}|(?![a-zA-Z]))/,
'one lowercase latin letter $': /^(?:([a-z])(?:$|[^a-zA-Z]))$/,
'$one lowercase latin letter$ $': /^\$(?:([a-z])(?:$|[^a-zA-Z]))\$$/,
'one lowercase greek letter $': /^(?:\$?[\u03B1-\u03C9]\$?|\$?\\(?:alpha|beta|gamma|delta|epsilon|zeta|eta|theta|iota|kappa|lambda|mu|nu|xi|omicron|pi|rho|sigma|tau|upsilon|phi|chi|psi|omega)\s*\$?)(?:\s+|\{\}|(?![a-zA-Z]))$/,
'digits': /^[0-9]+/,
'-9.,9': /^[+\-]?(?:[0-9]+(?:[,.][0-9]+)?|[0-9]*(?:\.[0-9]+))/,
'-9.,9 no missing 0': /^[+\-]?[0-9]+(?:[.,][0-9]+)?/,
'(-)(9.,9)(e)(99)': function (input) {
var m = input.match(/^(\+\-|\+\/\-|\+|\-|\\pm\s?)?([0-9]+(?:[,.][0-9]+)?|[0-9]*(?:\.[0-9]+)?)(\((?:[0-9]+(?:[,.][0-9]+)?|[0-9]*(?:\.[0-9]+)?)\))?(?:([eE]|\s*(\*|x|\\times|\u00D7)\s*10\^)([+\-]?[0-9]+|\{[+\-]?[0-9]+\}))?/)
if (m && m[0]) {
return { matchh: m.splice(1), remainder: input.substr(m[0].length) }
}
return null
},
'(-)(9)^(-9)': function (input) {
var m = input.match(/^(\+\-|\+\/\-|\+|\-|\\pm\s?)?([0-9]+(?:[,.][0-9]+)?|[0-9]*(?:\.[0-9]+)?)\^([+\-]?[0-9]+|\{[+\-]?[0-9]+\})/)
if (m && m[0]) {
return { matchh: m.splice(1), remainder: input.substr(m[0].length) }
}
return null
},
'state of aggregation $': function (input) { // or crystal system
var a = this['_findObserveGroups'](input, '', /^\([a-z]{1,3}(?=[\),])/, ')', '') // (aq), (aq,$\infty$), (aq, sat)
if (a && a.remainder.match(/^($|[\s,;\)\]\}])/)) { return a } // AND end of 'phrase'
var m = input.match(/^(?:\((?:\\ca\s?)?\$[amothc]\$\))/) // OR crystal system ($o$) (\ca$c$)
if (m) {
return { matchh: m[0], remainder: input.substr(m[0].length) }
}
return null
},
'_{(state of aggregation)}$': /^_\{(\([a-z]{1,3}\))\}/,
'\{[(': /^(?:\\\{|\[|\()/,
')]\}': /^(?:\)|\]|\\\})/,
', ': /^[,;]\s*/,
',': /^[,;]/,
'.': /^[.]/,
'. ': /^([.\u22C5\u00B7\u2022])\s*/,
'...': /^\.\.\.(?=$|[^.])/,
'* ': /^([*])\s*/,
'^{(...)}': function (input) { return this['_findObserveGroups'](input, '^{', '', '', '}') },
'^($...$)': function (input) { return this['_findObserveGroups'](input, '^', '$', '$', '') },
'^a': /^\^([0-9]+|[^\\_])/,
'^\\x{}{}': function (input) { return this['_findObserveGroups'](input, '^', /^\\[a-zA-Z]+\{/, '}', '', '', '{', '}', '', true) },
'^\\x{}': function (input) { return this['_findObserveGroups'](input, '^', /^\\[a-zA-Z]+\{/, '}', '') },
'^\\x': /^\^(\\[a-zA-Z]+)\s*/,
'^(-1)': /^\^(-?\d+)/,
'\'': /^'/,
'_{(...)}': function (input) { return this['_findObserveGroups'](input, '_{', '', '', '}') },
'_($...$)': function (input) { return this['_findObserveGroups'](input, '_', '$', '$', '') },
'_9': /^_([+\-]?[0-9]+|[^\\])/,
'_\\x{}{}': function (input) { return this['_findObserveGroups'](input, '_', /^\\[a-zA-Z]+\{/, '}', '', '', '{', '}', '', true) },
'_\\x{}': function (input) { return this['_findObserveGroups'](input, '_', /^\\[a-zA-Z]+\{/, '}', '') },
'_\\x': /^_(\\[a-zA-Z]+)\s*/,
'^_': /^(?:\^(?=_)|\_(?=\^)|[\^_]$)/,
'{}': /^\{\}/,
'{...}': function (input) { return this['_findObserveGroups'](input, '', '{', '}', '') },
'{(...)}': function (input) { return this['_findObserveGroups'](input, '{', '', '', '}') },
'$...$': function (input) { return this['_findObserveGroups'](input, '', '$', '$', '') },
'${(...)}$': function (input) { return this['_findObserveGroups'](input, '${', '', '', '}$') },
'$(...)$': function (input) { return this['_findObserveGroups'](input, '$', '', '', '$') },
'=<>': /^[=<>]/,
'#': /^[#\u2261]/,
'+': /^\+/,
'-$': /^-(?=[\s_},;\]/]|$|\([a-z]+\))/, // -space -, -; -] -/ -$ -state-of-aggregation
'-9': /^-(?=[0-9])/,
'- orbital overlap': /^-(?=(?:[spd]|sp)(?:$|[\s,;\)\]\}]))/,
'-': /^-/,
'pm-operator': /^(?:\\pm|\$\\pm\$|\+-|\+\/-)/,
'operator': /^(?:\+|(?:[\-=<>]|<<|>>|\\approx|\$\\approx\$)(?=\s|$|-?[0-9]))/,
'arrowUpDown': /^(?:v|\(v\)|\^|\(\^\))(?=$|[\s,;\)\]\}])/,
'\\bond{(...)}': function (input) { return this['_findObserveGroups'](input, '\\bond{', '', '', '}') },
'->': /^(?:<->|<-->|->|<-|<=>>|<<=>|<=>|[\u2192\u27F6\u21CC])/,
'CMT': /^[CMT](?=\[)/,
'[(...)]': function (input) { return this['_findObserveGroups'](input, '[', '', '', ']') },
'1st-level escape': /^(&|\\\\|\\hline)\s*/,
'\\,': /^(?:\\[,\ ;:])/, // \\x - but output no space before
'\\x{}{}': function (input) { return this['_findObserveGroups'](input, '', /^\\[a-zA-Z]+\{/, '}', '', '', '{', '}', '', true) },
'\\x{}': function (input) { return this['_findObserveGroups'](input, '', /^\\[a-zA-Z]+\{/, '}', '') },
'\\ca': /^\\ca(?:\s+|(?![a-zA-Z]))/,
'\\x': /^(?:\\[a-zA-Z]+\s*|\\[_&{}%])/,
'orbital': /^(?:[0-9]{1,2}[spdfgh]|[0-9]{0,2}sp)(?=$|[^a-zA-Z])/, // only those with numbers in front, because the others will be formatted correctly anyway
'others': /^[\/~|]/,
'\\frac{(...)}': function (input) { return this['_findObserveGroups'](input, '\\frac{', '', '', '}', '{', '', '', '}') },
'\\overset{(...)}': function (input) { return this['_findObserveGroups'](input, '\\overset{', '', '', '}', '{', '', '', '}') },
'\\underset{(...)}': function (input) { return this['_findObserveGroups'](input, '\\underset{', '', '', '}', '{', '', '', '}') },
'\\underbrace{(...)}': function (input) { return this['_findObserveGroups'](input, '\\underbrace{', '', '', '}_', '{', '', '', '}') },
'\\color{(...)}0': function (input) { return this['_findObserveGroups'](input, '\\color{', '', '', '}') },
'\\color{(...)}{(...)}1': function (input) { return this['_findObserveGroups'](input, '\\color{', '', '', '}', '{', '', '', '}') },
'\\color(...){(...)}2': function (input) { return this['_findObserveGroups'](input, '\\color', '\\', '', /^(?=\{)/, '{', '', '', '}') },
'\\ce{(...)}': function (input) { return this['_findObserveGroups'](input, '\\ce{', '', '', '}') },
'oxidation$': /^(?:[+-][IVX]+|\\pm\s*0|\$\\pm\$\s*0)$/,
'd-oxidation$': /^(?:[+-]?\s?[IVX]+|\\pm\s*0|\$\\pm\$\s*0)$/, // 0 could be oxidation or charge
'roman numeral': /^[IVX]+/,
'1/2$': /^[+\-]?(?:[0-9]+|\$[a-z]\$|[a-z])\/[0-9]+(?:\$[a-z]\$|[a-z])?$/,
'amount': function (input) {
var matchh
// e.g. 2, 0.5, 1/2, -2, n/2, +; $a$ could be added later in parsing
matchh = input.match(/^(?:(?:(?:\([+\-]?[0-9]+\/[0-9]+\)|[+\-]?(?:[0-9]+|\$[a-z]\$|[a-z])\/[0-9]+|[+\-]?[0-9]+[.,][0-9]+|[+\-]?\.[0-9]+|[+\-]?[0-9]+)(?:[a-z](?=\s*[A-Z]))?)|[+\-]?[a-z](?=\s*[A-Z])|\+(?!\s))/)
if (matchh) {
return { matchh: matchh[0], remainder: input.substr(matchh[0].length) }
}
var a = this['_findObserveGroups'](input, '', '$', '$', '')
if (a) { // e.g. $2n-1$, $-$
matchh = a.matchh.match(/^\$(?:\(?[+\-]?(?:[0-9]*[a-z]?[+\-])?[0-9]*[a-z](?:[+\-][0-9]*[a-z]?)?\)?|\+|-)\$$/)
if (matchh) {
return { matchh: matchh[0], remainder: input.substr(matchh[0].length) }
}
}
return null
},
'amount2': function (input) { return this['amount'](input) },
'(KV letters),': /^(?:[A-Z][a-z]{0,2}|i)(?=,)/,
'formula$': function (input) {
if (input.match(/^\([a-z]+\)$/)) { return null } // state of aggregation = no formula
var matchh = input.match(/^(?:[a-z]|(?:[0-9\ \+\-\,\.\(\)]+[a-z])+[0-9\ \+\-\,\.\(\)]*|(?:[a-z][0-9\ \+\-\,\.\(\)]+)+[a-z]?)$/)
if (matchh) {
return { matchh: matchh[0], remainder: input.substr(matchh[0].length) }
}
return null
},
'uprightEntities': /^(?:pH|pOH|pC|pK|iPr|iBu)(?=$|[^a-zA-Z])/,
'/': /^\s*(\/)\s*/,
'//': /^\s*(\/\/)\s*/,
'*': /^\s*\*\s*/,
'_findObserveGroups': function (input, begExcl, begIncl, endIncl, endExcl, beg2Excl, beg2Incl, end2Incl, end2Excl, combine) {
var matchh = this['__match'](input, begExcl)
if (matchh === null) { return null }
input = input.substr(matchh.length)
matchh = this['__match'](input, begIncl)
if (matchh === null) { return null }
var e = this['__findObserveGroups'](input, matchh.length, endIncl || endExcl)
if (e === null) { return null }
var match1 = input.substring(0, (endIncl ? e.endMatchEnd : e.endMatchBegin))
if (!(beg2Excl || beg2Incl)) {
return {
matchh: match1,
remainder: input.substr(e.endMatchEnd)
}
} else {
var group2 = this['_findObserveGroups'](input.substr(e.endMatchEnd), beg2Excl, beg2Incl, end2Incl, end2Excl)
if (group2 === null) { return null }
var matchRet = [match1, group2.matchh]
if (combine) { matchRet = matchRet.join('') }
return {
matchh: matchRet,
remainder: group2.remainder
}
}
},
'__match': function (input, pattern) {
if (typeof pattern === 'string') {
if (input.indexOf(pattern) !== 0) { return null }
return pattern
} else {
var matchh = input.match(pattern)
if (!matchh) { return null }
return matchh[0]
}
},
'__findObserveGroups': function (input, i, endChars) {
var braces = 0
while (i < input.length) {
var a = input.charAt(i)
var matchh = this['__match'](input.substr(i), endChars)
if (matchh !== null && braces === 0) {
return { endMatchBegin: i, endMatchEnd: i + matchh.length }
} else if (a === '{') {
braces++
} else if (a === '}') {
if (braces === 0) {
throw ['ExtraCloseMissingOpen', 'Extra close brace or missing open brace']
} else {
braces--
}
}
i++
}
if (braces > 0) {
return null
}
return null
}
}
//
// Matching function
// e.g. matchh("a", input) will look for the regexp called "a" and see if it matches
// returns null or {matchh:"a", remainder:"bc"}
//
mhchemParser.matchh = function (m, input) {
var pattern = mhchemParser.patterns[m]
if (pattern === undefined) {
throw ['MhchemBugP', 'mhchem bug P. Please report. (' + m + ')'] // Trying to use non-existing pattern
} else if (typeof pattern === 'function') {
return mhchemParser.patterns[m](input) // cannot use cached var pattern here, because some pattern functions need this===mhchemParser
} else { // RegExp
var matchh = input.match(pattern)
if (matchh) {
var mm
if (matchh[2]) {
mm = [ matchh[1], matchh[2] ]
} else if (matchh[1]) {
mm = matchh[1]
} else {
mm = matchh[0]
}
return { matchh: mm, remainder: input.substr(matchh[0].length) }
}
return null
}
}
//
// Generic state machine actions
//
mhchemParser.actions = {
'a=': function (buffer, m) { buffer.a = (buffer.a || '') + m },
'b=': function (buffer, m) { buffer.b = (buffer.b || '') + m },
'p=': function (buffer, m) { buffer.p = (buffer.p || '') + m },
'o=': function (buffer, m) { buffer.o = (buffer.o || '') + m },
'q=': function (buffer, m) { buffer.q = (buffer.q || '') + m },
'd=': function (buffer, m) { buffer.d = (buffer.d || '') + m },
'rm=': function (buffer, m) { buffer.rm = (buffer.rm || '') + m },
'text=': function (buffer, m) { buffer.text = (buffer.text || '') + m },
'insert': function (buffer, m, a) { return { type: a } },
'insert+p1': function (buffer, m, a) { return { type: a, p1: m } },
'insert+p1+p2': function (buffer, m, a) { return { type: a, p1: m[0], p2: m[1] } },
'copy': function (buffer, m) { return m },
'rm': function (buffer, m) { return { type: 'rm', p1: m } },
'text': function (buffer, m) { return mhchemParser.go(m, 'text') },
'{text}': function (buffer, m) {
var ret = [ '{' ]
ret = mhchemParser.concatNotUndefined(ret, mhchemParser.go(m, 'text'))
ret = mhchemParser.concatNotUndefined(ret, '}')
return ret
},
'tex-math': function (buffer, m) { return mhchemParser.go(m, 'tex-math') },
'tex-math tight': function (buffer, m) { return mhchemParser.go(m, 'tex-math tight') },
'bond': function (buffer, m, k) { return { type: 'bond', kind: k || m } },
'color0-output': function (buffer, m) { return { type: 'color0', color: m[0] } },
'ce': function (buffer, m) { return mhchemParser.go(m) },
'1/2': function (buffer, m) {
var ret
if (m.match(/^[+\-]/)) {
ret = [ m.substr(0, 1) ]
m = m.substr(1)
}
var n = m.match(/^([0-9]+|\$[a-z]\$|[a-z])\/([0-9]+)(\$[a-z]\$|[a-z])?$/)
n[1] = n[1].replace(/\$/g, '')
ret = mhchemParser.concatNotUndefined(ret, { type: 'frac', p1: n[1], p2: n[2] })
if (n[3]) {
n[3] = n[3].replace(/\$/g, '')
ret = mhchemParser.concatNotUndefined(ret, { type: 'tex-math', p1: n[3] })
}
return ret
},
'9,9': function (buffer, m) { return mhchemParser.go(m, '9,9') }
}
//
// State machine definitions
//
mhchemParser.stateMachines = {}
//
// convert { 'a': { '*': { action: 'output' } } } to [ { matchh: 'a', actions: { '*': { action: 'output' } } } ]
// with expansion of 'a|b' to 'a' and 'b' (at 2 places)
//
mhchemParser.createTransitions = function (o) {
var a, b, s, i
//
// 1. o ==> oo, expanding 'a|b'
//
var oo = {}
for (a in o) {
if (a.indexOf('|') !== -1) {
s = a.split('|')
for (i = 0; i < s.length; i++) {
oo[s[i]] = o[a]
}
} else {
oo[a] = o[a]
}
}
//
// 2. oo ==> transition array
//
var transitions = []
for (a in oo) {
var actions = {}
var ooa = oo[a]
for (b in ooa) {
//
// expanding action-state:'a|b' if needed
//
if (b.indexOf('|') !== -1) {
s = b.split('|')
for (i = 0; i < s.length; i++) {
actions[s[i]] = ooa[b]
}
} else {
actions[b] = ooa[b]
}
}
transitions.push({ matchh: a, actions: actions })
}
return transitions
}
//
//
// \ce state machines
//
//
// Transitions and actions of main parser
//
mhchemParser.stateMachines['ce'] = {
transitions: mhchemParser.createTransitions({
'empty': {
'*': { action: 'output' } },
'else': {
'0|1|2': { action: 'beginsWithBond=false', revisit: true, toContinue: true } },
'oxidation$': {
'0': { action: 'oxidation-output' } },
'CMT': {
'r': { action: 'rdt=', nextState: 'rt' },
'rd': { action: 'rqt=', nextState: 'rdt' } },
'arrowUpDown': {
'0|1|2|as': { action: [ 'sb=false', 'output', 'operator' ], nextState: '1' } },
'uprightEntities': {
'0|1|2': { action: [ 'o=', 'output' ], nextState: '1' } },
'orbital': {
'0|1|2|3': { action: 'o=', nextState: 'o' } },
'->': {
'0|1|2|3': { action: 'r=', nextState: 'r' },
'a|as': { action: [ 'output', 'r=' ], nextState: 'r' },
'*': { action: [ 'output', 'r=' ], nextState: 'r' } },
'+': {
'o': { action: 'd= kv', nextState: 'd' },
'd|D': { action: 'd=', nextState: 'd' },
'q': { action: 'd=', nextState: 'qd' },
'qd|qD': { action: 'd=', nextState: 'qd' },
'dq': { action: [ 'output', 'd=' ], nextState: 'd' },
'3': { action: [ 'sb=false', 'output', 'operator' ], nextState: '0' } },
'amount': {
'0|2': { action: 'a=', nextState: 'a' } },
'pm-operator': {
'0|1|2|a|as': { action: [ 'sb=false', 'output', { type: 'operator', option: '\\pm' } ], nextState: '0' } },
'operator': {
'0|1|2|a|as': { action: [ 'sb=false', 'output', 'operator' ], nextState: '0' } },
'-$': {
'o|q': { action: [ 'charge or bond', 'output' ], nextState: 'qd' },
'd': { action: 'd=', nextState: 'd' },
'D': { action: [ 'output', { type: 'bond', option: '-' } ], nextState: '3' },
'q': { action: 'd=', nextState: 'qd' },
'qd': { action: 'd=', nextState: 'qd' },
'qD|dq': { action: [ 'output', { type: 'bond', option: '-' } ], nextState: '3' } },
'-9': {
'3|o': { action: [ 'output', { type: 'insert', option: 'hyphen' } ], nextState: '3' } },
'- orbital overlap': {
'o': { action: { type: '- after o', option: true }, nextState: '2' },
'd': { action: { type: '- after d', option: true }, nextState: '2' } },
'-': {
'0|1|2': { action: [ { type: 'output', option: 1 }, 'beginsWithBond=true', { type: 'bond', option: '-' } ], nextState: '3' },
'3': { action: { type: 'bond', option: '-' } },
'a': { action: [ 'output', { type: 'insert', option: 'hyphen' } ], nextState: '2' },
'as': { action: [ { type: 'output', option: 2 }, { type: 'bond', option: '-' } ], nextState: '3' },
'b': { action: 'b=' },
'o': { action: '- after o', nextState: '2' },
'q': { action: '- after o', nextState: '2' },
'd|qd|dq': { action: '- after d', nextState: '2' },
'D|qD|p': { action: [ 'output', { type: 'bond', option: '-' } ], nextState: '3' } },
'amount2': {
'1|3': { action: 'a=', nextState: 'a' } },
'letters': {
'0|1|2|3|a|as|b|p|bp|o': { action: 'o=', nextState: 'o' },
'q|dq': { action: ['output', 'o='], nextState: 'o' },
'd|D|qd|qD': { action: 'o after d', nextState: 'o' } },
'digits': {
'o': { action: 'q=', nextState: 'q' },
'd|D': { action: 'q=', nextState: 'dq' },
'q': { action: [ 'output', 'o=' ], nextState: 'o' },
'a': { action: 'o=', nextState: 'o' } },
'space A': {
'b|p|bp': {} },
'space': {
'a': { nextState: 'as' },
'0': { action: 'sb=false' },
'1|2': { action: 'sb=true' },
'r|rt|rd|rdt|rdq': { action: 'output', nextState: '0' },
'*': { action: [ 'output', 'sb=true' ], nextState: '1'} },
'1st-level escape': {
'1|2': { action: [ 'output', { type: 'insert+p1', option: '1st-level escape' } ] },
'*': { action: [ 'output', { type: 'insert+p1', option: '1st-level escape' } ], nextState: '0' } },
'[(...)]': {
'r|rt': { action: 'rd=', nextState: 'rd' },
'rd|rdt': { action: 'rq=', nextState: 'rdq' } },
'...': {
'o|d|D|dq|qd|qD': { action: [ 'output', { type: 'bond', option: '...' } ], nextState: '3' },
'*': { action: [ { type: 'output', option: 1 }, { type: 'insert', option: 'ellipsis' } ], nextState: '1' } },
'. |* ': {
'*': { action: [ 'output', { type: 'insert', option: 'addition compound' } ], nextState: '1' } },
'state of aggregation $': {
'*': { action: [ 'output', 'state of aggregation' ], nextState: '1' } },
'\{[(': {
'a|as|o': { action: [ 'o=', 'output', 'parenthesisLevel++' ], nextState: '2' },
'0|1|2|3': { action: [ 'o=', 'output', 'parenthesisLevel++' ], nextState: '2' },
'*': { action: [ 'output', 'o=', 'output', 'parenthesisLevel++' ], nextState: '2' } },
')]\}': {
'0|1|2|3|b|p|bp|o': { action: [ 'o=', 'parenthesisLevel--' ], nextState: 'o' },
'a|as|d|D|q|qd|qD|dq': { action: [ 'output', 'o=', 'parenthesisLevel--' ], nextState: 'o' } },
', ': {
'*': { action: [ 'output', 'comma' ], nextState: '0' } },
'^_': { // ^ and _ without a sensible argument
'*': { } },
'^{(...)}|^($...$)': {
'0|1|2|as': { action: 'b=', nextState: 'b' },
'p': { action: 'b=', nextState: 'bp' },
'3|o': { action: 'd= kv', nextState: 'D' },
'q': { action: 'd=', nextState: 'qD' },
'd|D|qd|qD|dq': { action: [ 'output', 'd=' ], nextState: 'D' } },
'^a|^\\x{}{}|^\\x{}|^\\x|\'': {
'0|1|2|as': { action: 'b=', nextState: 'b' },
'p': { action: 'b=', nextState: 'bp' },
'3|o': { action: 'd= kv', nextState: 'd' },
'q': { action: 'd=', nextState: 'qd' },
'd|qd|D|qD': { action: 'd=' },
'dq': { action: [ 'output', 'd=' ], nextState: 'd' } },
'_{(state of aggregation)}$': {
'd|D|q|qd|qD|dq': { action: [ 'output', 'q=' ], nextState: 'q' } },
'_{(...)}|_($...$)|_9|_\\x{}{}|_\\x{}|_\\x': {
'0|1|2|as': { action: 'p=', nextState: 'p' },
'b': { action: 'p=', nextState: 'bp' },
'3|o': { action: 'q=', nextState: 'q' },
'd|D': { action: 'q=', nextState: 'dq' },
'q|qd|qD|dq': { action: [ 'output', 'q=' ], nextState: 'q' } },
'=<>': {
'0|1|2|3|a|as|o|q|d|D|qd|qD|dq': { action: [ { type: 'output', option: 2 }, 'bond' ], nextState: '3' } },
'#': {
'0|1|2|3|a|as|o': { action: [ { type: 'output', option: 2 }, { type: 'bond', option: '#' } ], nextState: '3' } },
'{}': {
'*': { action: { type: 'output', option: 1 }, nextState: '1' } },
'{...}': {
'0|1|2|3|a|as|b|p|bp': { action: 'o=', nextState: 'o' },
'o|d|D|q|qd|qD|dq': { action: [ 'output', 'o=' ], nextState: 'o' } },
'$...$': {
'a': { action: 'a=' }, // 2$n$
'0|1|2|3|as|b|p|bp|o': { action: 'o=', nextState: 'o' }, // not 'amount'
'as|o': { action: 'o=' },
'q|d|D|qd|qD|dq': { action: [ 'output', 'o=' ], nextState: 'o' } },
'\\bond{(...)}': {
'*': { action: [ { type: 'output', option: 2 }, 'bond' ], nextState: '3' } },
'\\frac{(...)}': {
'*': { action: [ { type: 'output', option: 1 }, 'frac-output' ], nextState: '3' } },
'\\overset{(...)}': {
'*': { action: [ { type: 'output', option: 2 }, 'overset-output' ], nextState: '3' } },
'\\underset{(...)}': {
'*': { action: [ { type: 'output', option: 2 }, 'underset-output' ], nextState: '3' } },
'\\underbrace{(...)}': {
'*': { action: [ { type: 'output', option: 2 }, 'underbrace-output' ], nextState: '3' } },
'\\color{(...)}{(...)}1|\\color(...){(...)}2': {
'*': { action: [ { type: 'output', option: 2 }, 'color-output' ], nextState: '3' } },
'\\color{(...)}0': {
'*': { action: [ { type: 'output', option: 2 }, 'color0-output' ] } },
'\\ce{(...)}': {
'*': { action: [ { type: 'output', option: 2 }, 'ce' ], nextState: '3' } },
'\\,': {
'*': { action: [ { type: 'output', option: 1 }, 'copy' ], nextState: '1' } },
'\\x{}{}|\\x{}|\\x': {
'0|1|2|3|a|as|b|p|bp|o|c0': { action: [ 'o=', 'output' ], nextState: '3' },
'*': { action: ['output', 'o=', 'output' ], nextState: '3' } },
'others': {
'*': { action: [ { type: 'output', option: 1 }, 'copy' ], nextState: '3' } },
'else2': {
'a': { action: 'a to o', nextState: 'o', revisit: true },
'as': { action: [ { type: 'output' }, 'sb=true' ], nextState: '1', revisit: true },
'r|rt|rd|rdt|rdq': { action: [ 'output' ], nextState: '0', revisit: true },
'*': { action: [ 'output', 'copy' ], nextState: '3' } }
}),
actions: {
'o after d': function (buffer, m) {
var ret
if (buffer.d.match(/^[0-9]+$/)) {
var tmp = buffer.d
buffer.d = undefined
ret = this['output'](buffer)
buffer.b = tmp
} else {
ret = this['output'](buffer)
}
mhchemParser.actions['o='](buffer, m)
return ret
},
'd= kv': function (buffer, m) {
buffer.d = m
buffer['d-type'] = 'kv'
},
'charge or bond': function (buffer, m) {
if (buffer['beginsWithBond']) {
var ret = mhchemParser.concatNotUndefined(ret, this['output'](buffer))
ret = mhchemParser.concatNotUndefined(ret, mhchemParser.actions['bond'](buffer, m, '-'))
return ret
} else {
buffer.d = m
}
},
'- after o': function (buffer, m, isOrbitalOverlap) {
var hyphenFollows = isOrbitalOverlap || this['_hyphenFollows'](buffer, m)
var ret = mhchemParser.concatNotUndefined(null, this['output'](buffer, m))
if (hyphenFollows) {
ret = mhchemParser.concatNotUndefined(ret, { type: 'hyphen' })
} else {
ret = mhchemParser.concatNotUndefined(ret, mhchemParser.actions['bond'](buffer, m, '-'))
}
return ret
},
'- after d': function (buffer, m, isOrbitalOverlap) {
var hyphenFollows = isOrbitalOverlap || this['_hyphenFollows'](buffer, m)
var ret
if (hyphenFollows) {
ret = mhchemParser.concatNotUndefined(ret, this['output'](buffer, m))
ret = mhchemParser.concatNotUndefined(ret, { type: 'hyphen' })
} else {
var c1 = mhchemParser.matchh('digits', buffer.d || '')
if (c1 && c1.remainder === '') {
ret = mhchemParser.concatNotUndefined(null, mhchemParser.actions['d='](buffer, m))
ret = mhchemParser.concatNotUndefined(ret, this['output'](buffer))
} else {
ret = mhchemParser.concatNotUndefined(ret, this['output'](buffer, m))
ret = mhchemParser.concatNotUndefined(ret, mhchemParser.actions['bond'](buffer, m, '-'))
}
}
return ret
},
'_hyphenFollows': function (buffer, m) {
var c1 = mhchemParser.matchh('orbital', buffer.o || '')
var c2 = mhchemParser.matchh('one lowercase greek letter $', buffer.o || '')
var c3 = mhchemParser.matchh('one lowercase latin letter $', buffer.o || '')
var c4 = mhchemParser.matchh('$one lowercase latin letter$ $', buffer.o || '')
var hyphenFollows = m === '-' && (c1 && c1.remainder === '' || c2 || c3 || c4)
if (hyphenFollows && !buffer.a && !buffer.b && !buffer.p && !buffer.d && !buffer.q && !c1 && c3) {
buffer.o = '$' + buffer.o + '$'
}
return hyphenFollows
},
'a to o': function (buffer, m) {
buffer.o = buffer.a
buffer.a = undefined
},
'sb=true': function (buffer, m) { buffer.sb = true },
'sb=false': function (buffer, m) { buffer.sb = false },
'beginsWithBond=true': function (buffer, m) { buffer.beginsWithBond = true },
'beginsWithBond=false': function (buffer, m) { buffer.beginsWithBond = false },
'parenthesisLevel++': function (buffer, m) { buffer.parenthesisLevel++ },
'parenthesisLevel--': function (buffer, m) { buffer.parenthesisLevel-- },
'state of aggregation': function (buffer, m) {
m = mhchemParser.go(m, 'o')
return { type: 'state of aggregation', p1: m }
},
'comma': function (buffer, m) {
var a = m.replace(/\s*$/, '')
var withSpace = (a !== m)
if (withSpace && buffer['parenthesisLevel'] === 0) {
return { type: 'comma enumeration L', p1: a }
} else {
return { type: 'comma enumeration M', p1: a }
}
},
'output': function (buffer, m, entityFollows) {
// entityFollows:
// undefined = if we have nothing else to output, also ignore the just read space (buffer.sb)
// 1 = an entity follows, never omit the space if there was one just read before (can only apply to state 1)
// 2 = 1 + the entity can have an amount, so output a\, instead of converting it to o (can only apply to states a|as)
var ret
if (!buffer.r) {
ret = []
if (!buffer.a && !buffer.b && !buffer.p && !buffer.o && !buffer.q && !buffer.d && !entityFollows) {
ret = null
} else {
if (buffer.sb) {
ret.push({ type: 'entitySkip' })
}
if (!buffer.o && !buffer.q && !buffer.d && !buffer.b && !buffer.p && entityFollows !== 2) {
buffer.o = buffer.a
buffer.a = undefined
} else if (!buffer.o && !buffer.q && !buffer.d && (buffer.b || buffer.p)) {
buffer.o = buffer.a
buffer.d = buffer.b
buffer.q = buffer.p
buffer.a = buffer.b = buffer.p = undefined
} else {
if (buffer.o && buffer['d-type'] === 'kv' && mhchemParser.matchh('d-oxidation$', buffer.d || '')) {
buffer['d-type'] = 'oxidation'
} else if (buffer.o && buffer['d-type'] === 'kv' && !buffer.q) {
buffer['d-type'] = undefined
}
}
buffer.a = mhchemParser.go(buffer.a, 'a')
buffer.b = mhchemParser.go(buffer.b, 'bd')
buffer.p = mhchemParser.go(buffer.p, 'pq')
buffer.o = mhchemParser.go(buffer.o, 'o')
if (buffer['d-type'] === 'oxidation') {
buffer.d = mhchemParser.go(buffer.d, 'oxidation')
} else {
buffer.d = mhchemParser.go(buffer.d, 'bd')
}
buffer.q = mhchemParser.go(buffer.q, 'pq')
ret.push({
type: 'chemfive',
a: buffer.a,
b: buffer.b,
p: buffer.p,
o: buffer.o,
q: buffer.q,
d: buffer.d,
'd-type': buffer['d-type']
})
}
} else { // r
if (buffer.rdt === 'M') {
buffer.rd = mhchemParser.go(buffer.rd, 'tex-math')
} else if (buffer.rdt === 'T') {
buffer.rd = [ { type: 'text', p1: buffer.rd } ]
} else {
buffer.rd = mhchemParser.go(buffer.rd)
}
if (buffer.rqt === 'M') {
buffer.rq = mhchemParser.go(buffer.rq, 'tex-math')
} else if (buffer.rqt === 'T') {
buffer.rq = [ { type: 'text', p1: buffer.rq } ]
} else {
buffer.rq = mhchemParser.go(buffer.rq)
}
ret = {
type: 'arrow',
r: buffer.r,
rd: buffer.rd,
rq: buffer.rq
}
}
for (var p in buffer) {
if (p !== 'parenthesisLevel' && p !== 'beginsWithBond') {
delete buffer[p]
}
}
return ret
},
'oxidation-output': function (buffer, m) {
var ret = [ '{' ]
ret = mhchemParser.concatNotUndefined(ret, mhchemParser.go(m, 'oxidation'))
ret = ret.concat([ '}' ])
return ret
},
'frac-output': function (buffer, m) {
return { type: 'frac-ce', p1: mhchemParser.go(m[0]), p2: mhchemParser.go(m[1]) }
},
'overset-output': function (buffer, m) {
return { type: 'overset', p1: mhchemParser.go(m[0]), p2: mhchemParser.go(m[1]) }
},
'underset-output': function (buffer, m) {
return { type: 'underset', p1: mhchemParser.go(m[0]), p2: mhchemParser.go(m[1]) }
},
'underbrace-output': function (buffer, m) {
return { type: 'underbrace', p1: mhchemParser.go(m[0]), p2: mhchemParser.go(m[1]) }
},
'color-output': function (buffer, m) {
return { type: 'color', color1: m[0], color2: mhchemParser.go(m[1]) }
},
'r=': function (buffer, m) { buffer.r = (buffer.r || '') + m },
'rdt=': function (buffer, m) { buffer.rdt = (buffer.rdt || '') + m },
'rd=': function (buffer, m) { buffer.rd = (buffer.rd || '') + m },
'rqt=': function (buffer, m) { buffer.rqt = (buffer.rqt || '') + m },
'rq=': function (buffer, m) { buffer.rq = (buffer.rq || '') + m },
'operator': function (buffer, m, p1) { return { type: 'operator', kind: (p1 || m) } }
}
}
//
// Transitions and actions of a parser
//
mhchemParser.stateMachines['a'] = {
transitions: mhchemParser.createTransitions({
'empty': {
'*': {} },
'1/2$': {
'0': { action: '1/2' } },
'else': {
'0': { nextState: '1', revisit: true } },
'$(...)$': {
'*': { action: 'tex-math tight', nextState: '1' } },
',': {
'*': { action: { type: 'insert', option: 'commaDecimal' } } },
'else2': {
'*': { action: 'copy' } }
}),
actions: {}
}
//
// Transitions and actions of o parser
//
mhchemParser.stateMachines['o'] = {
transitions: mhchemParser.createTransitions({
'empty': {
'*': {} },
'1/2$': {
'0': { action: '1/2' } },
'else': {
'0': { nextState: '1', revisit: true } },
'letters': {
'*': { action: 'rm' } },
'\\ca': {
'*': { action: { type: 'insert', option: 'circa' } } },
'\\x{}{}|\\x{}|\\x': {
'*': { action: 'copy' } },
'${(...)}$|$(...)$': {
'*': { action: 'tex-math' } },
'{(...)}': {
'*': { action: '{text}' } },
'else2': {
'*': { action: 'copy' } }
}),
actions: {}
}
//
// Transitions and actions of text parser
//
mhchemParser.stateMachines['text'] = {
transitions: mhchemParser.createTransitions({
'empty': {
'*': { action: 'output' } },
'{...}': {
'*': { action: 'text=' } },
'${(...)}$|$(...)$': {
'*': { action: 'tex-math' } },
'\\greek': {
'*': { action: [ 'output', 'rm' ] } },
'\\,|\\x{}{}|\\x{}|\\x': {
'*': { action: [ 'output', 'copy' ] } },
'else': {
'*': { action: 'text=' } }
}),
actions: {
'output': function (buffer, m) {
if (buffer.text) {
var ret = { type: 'text', p1: buffer.text }
for (var p in buffer) { delete buffer[p] }
return ret
}
return null
}
}
}
//
// Transitions and actions of pq parser
//
mhchemParser.stateMachines['pq'] = {
transitions: mhchemParser.createTransitions({
'empty': {
'*': {} },
'state of aggregation $': {
'*': { action: 'state of aggregation' } },
'i$': {
'0': { nextState: '!f', revisit: true } },
'(KV letters),': {
'0': { action: 'rm', nextState: '0' } },
'formula$': {
'0': { nextState: 'f', revisit: true } },
'1/2$': {
'0': { action: '1/2' } },
'else': {
'0': { nextState: '!f', revisit: true } },
'${(...)}$|$(...)$': {
'*': { action: 'tex-math' } },
'{(...)}': {
'*': { action: 'text' } },
'a-z': {
'f': { action: 'tex-math' } },
'letters': {
'*': { action: 'rm' } },
'-9.,9': {
'*': { action: '9,9' } },
',': {
'*': { action: { type: 'insert+p1', option: 'comma enumeration S' } } },
'\\color{(...)}{(...)}1|\\color(...){(...)}2': {
'*': { action: 'color-output' } },
'\\color{(...)}0': {
'*': { action: 'color0-output' } },
'\\ce{(...)}': {
'*': { action: 'ce' } },
'\\,|\\x{}{}|\\x{}|\\x': {
'*': { action: 'copy' } },
'else2': {
'*': { action: 'copy' } }
}),
actions: {
'state of aggregation': function (buffer, m) {
m = mhchemParser.go(m, 'o')
return { type: 'state of aggregation subscript', p1: m }
},
'color-output': function (buffer, m) {
return { type: 'color', color1: m[0], color2: mhchemParser.go(m[1], 'pq') }
}
}
}
//
// Transitions and actions of bd parser
//
mhchemParser.stateMachines['bd'] = {
transitions: mhchemParser.createTransitions({
'empty': {
'*': {} },
'x$': {
'0': { nextState: '!f', revisit: true } },
'formula$': {
'0': { nextState: 'f', revisit: true } },
'else': {
'0': { nextState: '!f', revisit: true } },
'-9.,9 no missing 0': {
'*': { action: '9,9' } },
'.': {
'*': { action: { type: 'insert', option: 'electron dot' } } },
'a-z': {
'f': { action: 'tex-math' } },
'x': {
'*': { action: { type: 'insert', option: 'KV x' } } },
'letters': {
'*': { action: 'rm' } },
'\'': {
'*': { action: { type: 'insert', option: 'prime' } } },
'${(...)}$|$(...)$': {
'*': { action: 'tex-math' } },
'{(...)}': {
'*': { action: 'text' } },
'\\color{(...)}{(...)}1|\\color(...){(...)}2': {
'*': { action: 'color-output' } },
'\\color{(...)}0': {
'*': { action: 'color0-output' } },
'\\ce{(...)}': {
'*': { action: 'ce' } },
'\\,|\\x{}{}|\\x{}|\\x': {
'*': { action: 'copy' } },
'else2': {
'*': { action: 'copy' } }
}),
actions: {
'color-output': function (buffer, m) {
return { type: 'color', color1: m[0], color2: mhchemParser.go(m[1], 'bd') }
}
}
}
//
// Transitions and actions of oxidation parser
//
mhchemParser.stateMachines['oxidation'] = {
transitions: mhchemParser.createTransitions({
'empty': {
'*': {} },
'roman numeral': {
'*': { action: 'roman-numeral' } },
'${(...)}$|$(...)$': {
'*': { action: 'tex-math' } },
'else': {
'*': { action: 'copy' } }
}),
actions: {
'roman-numeral': function (buffer, m) { return { type: 'roman numeral', p1: m } }
}
}
//
// Transitions and actions of tex-math parser
//
mhchemParser.stateMachines['tex-math'] = {
transitions: mhchemParser.createTransitions({
'empty': {
'*': { action: 'output' } },
'\\ce{(...)}': {
'*': { action: [ 'output', 'ce' ] } },
'{...}|\\,|\\x{}{}|\\x{}|\\x': {
'*': { action: 'o=' } },
'else': {
'*': { action: 'o=' } }
}),
actions: {
'output': function (buffer, m) {
if (buffer.o) {
var ret = { type: 'tex-math', p1: buffer.o }
for (var p in buffer) { delete buffer[p] }
return ret
}
return null
}
}
}
//
// Transitions and actions of tex-math-tight parser
//
mhchemParser.stateMachines['tex-math tight'] = {
transitions: mhchemParser.createTransitions({
'empty': {
'*': { action: 'output' } },
'\\ce{(...)}': {
'*': { action: [ 'output', 'ce' ] } },
'{...}|\\,|\\x{}{}|\\x{}|\\x': {
'*': { action: 'o=' } },
'-|+': {
'*': { action: 'tight operator' } },
'else': {
'*': { action: 'o=' } }
}),
actions: {
'tight operator': function (buffer, m) { buffer.o = (buffer.o || '') + '{' + m + '}' },
'output': function (buffer, m) {
if (buffer.o) {
var ret = { type: 'tex-math', p1: buffer.o }
for (var p in buffer) { delete buffer[p] }
return ret
}
return null
}
}
}
//
// Transitions and actions of 9,9 parser
//
mhchemParser.stateMachines['9,9'] = {
transitions: mhchemParser.createTransitions({
'empty': {
'*': {} },
',': {
'*': { action: 'comma' } },
'else': {
'*': { action: 'copy' } }
}),
actions: {
'comma': function (buffer, m) { return { type: 'commaDecimal' } }
}
}
//
//
// \pu state machines
//
//
// Transitions and actions of pu main parser
//
mhchemParser.stateMachines['pu'] = {
transitions: mhchemParser.createTransitions({
'empty': {
'*': { action: 'output' } },
'\{[(|)]\}': {
'0|a': { action: 'copy' } },
'(-)(9)^(-9)': {
'0': { action: 'number^', nextState: 'a' } },
'(-)(9.,9)(e)(99)': {
'0': { action: 'enumber', nextState: 'a' } },
'space': {
'0|a': {} },
'pm-operator': {
'0|a': { action: { type: 'operator', option: '\\pm' }, nextState: '0' } },
'operator': {
'0|a': { action: 'copy', nextState: '0' } },
'//': {
'd': { action: 'o=', nextState: '/' } },
'/': {
'd': { action: 'o=', nextState: '/' } },
'{...}|else': {
'0|d': { action: 'd=', nextState: 'd' },
'a': { action: [ 'space', 'd=' ], nextState: 'd' },
'/|q': { action: 'q=', nextState: 'q' } }
}),
actions: {
'enumber': function (buffer, m) {
var ret = []
if (m[0] === '+-' || m[0] === '+/-') {
ret.push('\\pm ')
} else if (m[0]) {
ret.push(m[0])
}
if (m[1]) {
ret = mhchemParser.concatNotUndefined(ret, mhchemParser.go(m[1], 'pu-9,9'))
if (m[2]) {
if (m[2].match(/[,.]/)) {
ret = mhchemParser.concatNotUndefined(ret, mhchemParser.go(m[2], 'pu-9,9'))
} else {
ret.push(m[2])
}
}
m[3] = m[4] || m[3]
if (m[3]) {
m[3] = m[3].trim()
if (m[3] === 'e' || m[3].substr(0, 1) === '*') {
ret.push({ type: 'cdot' })
} else {
ret.push({ type: 'times' })
}
}
}
if (m[3]) {
ret.push('10^{' + m[5] + '}')
}
return ret
},
'number^': function (buffer, m) {
var ret = []
if (m[0] === '+-' || m[0] === '+/-') {
ret.push('\\pm ')
} else if (m[0]) {
ret.push(m[0])
}
ret = mhchemParser.concatNotUndefined(ret, mhchemParser.go(m[1], 'pu-9,9'))
ret.push('^{' + m[2] + '}')
return ret
},
'operator': function (buffer, m, p1) { return { type: 'operator', kind: (p1 || m) } },
'space': function (buffer, m) { return { type: 'pu-space-1' } },
'output': function (buffer, m) {
var ret
var md = mhchemParser.matchh('{(...)}', buffer.d || '')
if (md && md.remainder === '') { buffer.d = md.matchh }
var mq = mhchemParser.matchh('{(...)}', buffer.q || '')
if (mq && mq.remainder === '') { buffer.q = mq.matchh }
if (buffer.d) {
buffer.d = buffer.d.replace(/\u00B0C|\^oC|\^{o}C/g, '{}^{\\circ}C')
buffer.d = buffer.d.replace(/\u00B0F|\^oF|\^{o}F/g, '{}^{\\circ}F')
}
if (buffer.q) { // fraction
buffer.d = mhchemParser.go(buffer.d, 'pu')
buffer.q = buffer.q.replace(/\u00B0C|\^oC|\^{o}C/g, '{}^{\\circ}C')
buffer.q = buffer.q.replace(/\u00B0F|\^oF|\^{o}F/g, '{}^{\\circ}F')
buffer.q = mhchemParser.go(buffer.q, 'pu')
if (buffer.o === '//') {
ret = { type: 'pu-frac', p1: buffer.d, p2: buffer.q }
} else {
ret = buffer.d
if (buffer.d.length > 1 || buffer.q.length > 1) {
ret = mhchemParser.concatNotUndefined(ret, { type: ' / ' })
} else {
ret = mhchemParser.concatNotUndefined(ret, { type: '/' })
}
ret = mhchemParser.concatNotUndefined(ret, buffer.q)
}
} else { // no fraction
ret = mhchemParser.go(buffer.d, 'pu-2')
}
for (var p in buffer) { delete buffer[p] }
return ret
}
}
}
//
// Transitions and actions of pu-2 parser
//
mhchemParser.stateMachines['pu-2'] = {
transitions: mhchemParser.createTransitions({
'empty': {
'*': { action: 'output' } },
'*': {
'*': { action: [ 'output', 'cdot' ], nextState: '0' } },
'\\x': {
'*': { action: 'rm=' }, nextState: '1' },
'space': {
'*': { action: [ 'output', 'space' ], nextState: '0' } },
'^{(...)}|^(-1)': {
'1': { action: '^(-1)' } },
'-9.,9': {
'0': { action: 'rm=', nextState: '0' },
'1': { action: '^(-1)', nextState: '0' } },
'{...}|else': {
'*': { action: 'rm=', nextState: '1' } }
}),
actions: {
'cdot': function (buffer, m) { return { type: 'tight cdot' } },
'^(-1)': function (buffer, m) { buffer.rm += '^{' + m + '}' },
'space': function (buffer, m) { return { type: 'pu-space-2' } },
'output': function (buffer, m) {
var ret
if (buffer.rm) {
var mrm = mhchemParser.matchh('{(...)}', buffer.rm || '')
if (mrm && mrm.remainder === '') {
ret = mhchemParser.go(mrm.matchh, 'pu')
} else {
ret = { type: 'rm', p1: buffer.rm }
}
}
for (var p in buffer) { delete buffer[p] }
return ret
}
}
}
//
// Transitions and actions of 9,9 parser
//
mhchemParser.stateMachines['pu-9,9'] = {
transitions: mhchemParser.createTransitions({
'empty': {
'0': { action: 'output-0' },
'o': { action: 'output-o' } },
',': {
'0': { action: [ 'output-0', 'comma' ], nextState: 'o' } },
'.': {
'0': { action: [ 'output-0', 'copy' ], nextState: 'o' } },
'else': {
'*': { action: 'text=' } }
}),
actions: {
'comma': function (buffer, m) { return { type: 'commaDecimal' } },
'output-0': function (buffer, m) {
var ret = []
if (buffer.text.length > 4) {
var a = buffer.text.length % 3
if (a === 0) { a = 3 }
for (var i = buffer.text.length - 3; i > 0; i -= 3) {
ret.push(buffer.text.substr(i, 3))
ret.push({ type: '1000 separator' })
}
ret.push(buffer.text.substr(0, a))
ret.reverse()
} else {
ret.push(buffer.text)
}
for (var p in buffer) { delete buffer[p] }
return ret
},
'output-o': function (buffer, m) {
var ret = []
if (buffer.text.length > 4) {
var a = buffer.text.length - 3
for (var i = 0; i < a; i += 3) {
ret.push(buffer.text.substr(i, 3))
ret.push({ type: '1000 separator' })
}
ret.push(buffer.text.substr(i))
} else {
ret.push(buffer.text)
}
for (var p in buffer) { delete buffer[p] }
return ret
}
}
}
//
//
// Take MhchemParser output and convert it to TeX
// (recursive)
//
//
var texify = {
types: {
'chemfive': function (buf) {
var res = ''
buf.a = texify.go2(buf.a)
buf.b = texify.go2(buf.b)
buf.p = texify.go2(buf.p)
buf.o = texify.go2(buf.o)
buf.q = texify.go2(buf.q)
buf.d = texify.go2(buf.d)
//
// a
//
if (buf.a) {
if (buf.a.match(/^[+\-]/)) { buf.a = '{\\sf ' + buf.a + '}' }
res += buf.a + '\\,'
}
//
// b and p
//
if (buf.b || buf.p) {
res += '{\\vphantom{X}}'
res += '^{\\hphantom{' + (buf.b || '') + '}}_{\\hphantom{' + (buf.p || '') + '}}'
res += '{\\vphantom{X}}'
res += '^{\\smash[t]{\\vphantom{2}}\\llap{' + (buf.b || '') + '}}'
res += '_{\\vphantom{2}\\llap{\\smash[t]{' + (buf.p || '') + '}}}'
}
//
// o
//
if (buf.o) {
if (buf.o.match(/^[+\-]/)) { buf.o = '{' + buf.o + '}' }
res += buf.o
}
//
// q and d
//
if (buf['d-type'] === 'kv') {
if (buf.d || buf.q) {
res += '{\\vphantom{X}}'
}
if (buf.d) {
res += '^{\\sf ' + buf.d + '}'
}
if (buf.q) {
res += '_{\\smash[t]{\\sf ' + buf.q + '}}'
}
} else if (buf['d-type'] === 'oxidation') {
if (buf.d) {
res += '{\\vphantom{X}}'
res += '^{\\sf ' + buf.d + '}'
}
if (buf.q) {
res += '{\\vphantom{X}}'
res += '_{\\smash[t]{\\sf ' + buf.q + '}}'
}
} else {
if (buf.q) {
res += '{\\vphantom{X}}'
res += '_{\\smash[t]{\\sf ' + buf.q + '}}'
}
if (buf.d) {
res += '{\\sf \\vphantom{X}}'
res += '^{\\sf ' + buf.d + '}'
}
}
return res
},
'rm': function (buf) { return '\\mathrm{\\sf ' + buf.p1 + '}' },
'text': function (buf) {
if (buf.p1.match(/[\^_]/)) {
buf.p1 = buf.p1.replace(' ', '~').replace('-', '\\text{-}')
return '\\mathrm{\\sf ' + buf.p1 + '}'
} else {
return '\\text{\\sf ' + buf.p1 + '}'
}
},
'roman numeral': function (buf) { return '\\mathrm{\\sf ' + buf.p1 + '}' },
'state of aggregation': function (buf) { return '\\mskip2mu ' + texify.go2(buf.p1) },
'state of aggregation subscript': function (buf) { return '\\mskip1mu ' + texify.go2(buf.p1) },
'bond': function (buf) {
var ret = texify.bonds[buf.kind]
if (!ret) {
throw ['MhchemErrorBond', 'mhchem Error. Unknown bond type (' + buf.kind + ')']
}
return ret
},
'frac': function (buf) {
var c = '\\frac{\\sf ' + buf.p1 + '}{\\sf ' + buf.p2 + '}'
return '\\mathchoice{\\textstyle' + c + '}{' + c + '}{' + c + '}{' + c + '}'
},
'pu-frac': function (buf) {
var c = '\\frac{' + texify.go2(buf.p1) + '}{' + texify.go2(buf.p2) + '}'
return '\\mathchoice{\\textstyle' + c + '}{' + c + '}{' + c + '}{' + c + '}'
},
'tex-math': function (buf) { return buf.p1 + ' ' },
'frac-ce': function (buf) {
return '\\frac{' + texify.go2(buf.p1) + '}{' + texify.go2(buf.p2) + '}'
},
'overset': function (buf) {
return '\\overset{' + texify.go2(buf.p1) + '}{' + texify.go2(buf.p2) + '}'
},
'underset': function (buf) {
return '\\underset{' + texify.go2(buf.p1) + '}{' + texify.go2(buf.p2) + '}'
},
'underbrace': function (buf) {
return '\\underbrace{' + texify.go2(buf.p1) + '}_{' + texify.go2(buf.p2) + '}'
},
'color': function (buf) {
return '{\\color{' + buf.color1 + '}{' + texify.go2(buf.color2) + '}}'
},
'color0': function (buf) {
return '\\color{' + buf.color + '}'
},
'arrow': function (buf) {
buf.rd = texify.go2(buf.rd)
buf.rq = texify.go2(buf.rq)
var arrow = texify.arrows[buf.r]
if (buf.rd || buf.rq) {
if (buf.r === '<=>' || buf.r === '<=>>' || buf.r === '<<=>' || buf.r === '<-->') {
// arrows that cannot stretch correctly yet, https://github.com/mathjax/MathJax/issues/1491
arrow = '\\long' + arrow
if (buf.rd) { arrow = '\\overset{' + buf.rd + '}{' + arrow + '}' }
if (buf.rq) { arrow = '\\underset{\\lower7mu{' + buf.rq + '}}{' + arrow + '}' }
arrow = ' {}\\mathrel{' + arrow + '}{} '
} else {
if (buf.rq) { arrow += '[{' + buf.rq + '}]' }
arrow += '{' + buf.rd + '}'
arrow = ' {}\\mathrel{\\x' + arrow + '}{} '
}
} else {
arrow = ' {}\\mathrel{\\long' + arrow + '}{} '
}
return arrow
},
'operator': function (buf) { return texify.operators[buf.kind] }
},
arrows: {
'->': 'rightarrow',
'\u2192': 'rightarrow',
'\u27F6': 'rightarrow',
'<-': 'leftarrow',
'<->': 'leftrightarrow',
'<-->': 'leftrightarrows',
'<=>': 'rightleftharpoons',
'\u21CC': 'rightleftharpoons',
'<=>>': 'Rightleftharpoons',
'<<=>': 'Leftrightharpoons'
},
bonds: {
'-': '{-}',
'1': '{-}',
'=': '{=}',
'2': '{=}',
'#': '{\\equiv}',
'3': '{\\equiv}',
'~': '{\\tripledash}',
'~-': '{\\rlap{\\lower.1em{-}}\\raise.1em{\\tripledash}}',
'~=': '{\\rlap{\\lower.2em{-}}\\rlap{\\raise.2em{\\tripledash}}-}',
'~--': '{\\rlap{\\lower.2em{-}}\\rlap{\\raise.2em{\\tripledash}}-}',
'-~-': '{\\rlap{\\lower.2em{-}}\\rlap{\\raise.2em{-}}\\tripledash}',
'...': '{{\\cdot}{\\cdot}{\\cdot}}',
'....': '{{\\cdot}{\\cdot}{\\cdot}{\\cdot}}',
'->': '{\\rightarrow}',
'<-': '{\\leftarrow}',
'<': '{<}',
'>': '{>}'
},
entities: {
'space': ' ',
'entitySkip': '~',
'pu-space-1': '~',
'pu-space-2': '\\mkern3mu ',
'1000 separator': '\\mkern2mu ',
'commaDecimal': '{,}',
'comma enumeration L': '{{0}}\\mkern6mu ',
'comma enumeration M': '{{0}}\\mkern3mu ',
'comma enumeration S': '{{0}}\\mkern1mu ',
'hyphen': '\\text{-}',
'addition compound': '\\,{\\cdot}\\,',
'electron dot': '\\mkern1mu \\bullet\\mkern1mu ',
'KV x': '{\\times}',
'prime': '\\prime ',
'cdot': '\\cdot ',
'tight cdot': '\\mkern1mu{\\cdot}\\mkern1mu ',
'times': '\\times ',
'circa': '{\\sim}',
'^': 'uparrow',
'v': 'downarrow',
'ellipsis': '\\ldots ',
'/': '/',
' / ': '\\,/\\,',
'1st-level escape': '{0} ' // &, \\\\, \\hline
},
operators: {
'+': ' {}+{} ',
'-': ' {}-{} ',
'=': ' {}={} ',
'<': ' {}<{} ',
'>': ' {}>{} ',
'<<': ' {}\\ll{} ',
'>>': ' {}\\gg{} ',
'\\pm': ' {}\\pm{} ',
'\\approx': ' {}\\approx{} ',
'$\\approx$': ' {}\\approx{} ',
'v': ' \\downarrow{} ',
'(v)': ' \\downarrow{} ',
'^': ' \\uparrow{} ',
'(^)': ' \\uparrow{} '
},
go: function (input, isInner) {
if (!input) { return input }
var res = ''
var cee = false
for (var i = 0; i < input.length; i++) {
var inputi = input[i]
if (typeof inputi === 'string') {
res += inputi
} else if (this.types[inputi.type]) {
res += this.types[inputi.type](inputi)
} else if (this.entities[inputi.type]) {
var a = this.entities[inputi.type]
a = a.replace('{0}', inputi.p1 || '')
a = a.replace('{1}', inputi.p2 || '')
res += a
if (inputi.type === '1st-level escape') { cee = true }
} else {
throw ['MhchemBugT', 'mhchem bug T. Please report.'] // Missing texify rule or unknown MhchemParser output
}
}
if (!isInner && !cee) {
res = '{' + res + '}'
}
return res
},
go2: function (input) {
return this.go(input, true)
}
}
MathJax.Extension['TeX/mhchem'].CE = CE
/***************************************************************************/
TEX.Definitions.Add({
macros: {
//
// Set up the macros for chemistry
//
ce: 'CE',
pu: 'PU',
//
// Make these load AMSmath package (redefined below when loaded)
//
xleftrightarrow: ['Extension', 'AMSmath'],
xrightleftharpoons: ['Extension', 'AMSmath'],
xRightleftharpoons: ['Extension', 'AMSmath'],
xLeftrightharpoons: ['Extension', 'AMSmath'],
// FIXME: These don't work well in FF NativeMML mode
longrightleftharpoons: ['Macro', '\\stackrel{\\textstyle{-}\\!\\!{\\rightharpoonup}}{\\smash{{\\leftharpoondown}\\!\\!{-}}}'],
longRightleftharpoons: ['Macro', '\\stackrel{\\textstyle{-}\\!\\!{\\rightharpoonup}}{\\smash{\\leftharpoondown}}'],
longLeftrightharpoons: ['Macro', '\\stackrel{\\textstyle\\vphantom{{-}}{\\rightharpoonup}}{\\smash{{\\leftharpoondown}\\!\\!{-}}}'],
longleftrightarrows: ['Macro', '\\stackrel{\\longrightarrow}{\\smash{\\longleftarrow}\\Rule{0px}{.25em}{0px}}'],
//
// Needed for \bond for the ~ forms
// Not perfectly aligned when zoomed in, but on 100%
//
tripledash: ['Macro', '\\vphantom{-}\\raise2mu{\\kern2mu\\tiny\\text{-}\\kern1mu\\text{-}\\kern1mu\\text{-}\\kern2mu}']
}
}, null, true)
if (!MathJax.Extension['TeX/AMSmath']) {
TEX.Definitions.Add({
macros: {
xrightarrow: ['Extension', 'AMSmath'],
xleftarrow: ['Extension', 'AMSmath']
}
}, null, true)
}
//
// These arrows need to wait until AMSmath is loaded
//
MathJax.Hub.Register.StartupHook('TeX AMSmath Ready', function () {
TEX.Definitions.Add({
macros: {
//
// Some of these are hacks for now
//
xleftrightarrow: ['xArrow', 0x2194, 6, 6],
xrightleftharpoons: ['xArrow', 0x21CC, 5, 7], // FIXME: doesn't stretch in HTML-CSS output
xRightleftharpoons: ['xArrow', 0x21CC, 5, 7], // FIXME: how should this be handled?
xLeftrightharpoons: ['xArrow', 0x21CC, 5, 7]
}
}, null, true)
})
TEX.Parse.Augment({
//
// Implements \ce and friends
//
CE: function (name) {
var arg = this.GetArgument(name)
var tex = CE(arg).Parse()
this.string = tex + this.string.substr(this.i); this.i = 0
},
PU: function (name) {
var arg = this.GetArgument(name)
var tex = CE(arg).Parse('pu')
this.string = tex + this.string.substr(this.i); this.i = 0
}
})
//
// Indicate that the extension is ready
//
MathJax.Hub.Startup.signal.Post('TeX mhchem Ready')
})
MathJax.Ajax.loadComplete('[mhchem]/unpacked/mhchem.js')
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment