Last active
April 15, 2020 08:28
-
-
Save sylvchev/6c4e10a45417d67214f1204745895d29 to your computer and use it in GitHub Desktop.
Verification regarding weighted means of SPD matrices
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
import pyriemann | |
import numpy as np | |
from pyriemann.utils.mean import mean_riemann | |
def generate_cov(Nt, Ne): | |
"""Generate a set of cavariances matrices for test purpose""" | |
rs = np.random.RandomState(1234) | |
diags = 2.0 + 0.1 * rs.randn(Nt, Ne) | |
A = 2*rs.rand(Ne, Ne) - 1 | |
A /= np.atleast_2d(np.sqrt(np.sum(A**2, 1))).T | |
covmats = np.empty((Nt, Ne, Ne)) | |
for i in range(Nt): | |
covmats[i] = np.dot(np.dot(A, np.diag(diags[i])), A.T) | |
return covmats, diags, A | |
covs, diags, A = generate_cov(4, 5) | |
mean1 = mean_riemann(covs, sample_weight=np.array([0.1, 0.2, 0.3, 0.4])) | |
covs2 = np.empty_like(covs) | |
for i in range(4): | |
covs2[i,:,:] = covs[i,:,:]*(i+1)/10 | |
mean2 = mean_riemann(covs2) | |
print(mean1) | |
print(mean2) | |
mean_equi = mean_riemann(covs, sample_weight=np.array([0.25, 0.25, 0.25, 0.25])) | |
covs3 = np.empty_like(covs) | |
for i in range (4): | |
covs3[i,:,:] = covs[i,:,:]*0.25 | |
mean_equi2 = mean_riemann(covs3) | |
print(mean_equi) | |
print(mean_equi2) |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment