run_sim.bash

#!/bin/bash

CURDIR=$(cd $(dirname $0);pwd)
LOGDIR=${CURDIR}/log

mkdir -p ${LOGDIR}

SOURCE=hopnet_dynamics.c
TARGET=hopnet_dynamics
CFLAGS="-Ofast -Wall"

N_NEURONS=1000   # The number of neurons
N_PATTERNS=80   # The maximum number of patterns
N_ITERATIONS=25  # Maximum number of iterations for recall
SELF_CONNECT=false

echo "gcc ${CFLAGS} ${SOURCE} -o ${TARGET}"
gcc ${CFLAGS} ${SOURCE} -o ${TARGET}

for i in 0.05 0.1 0.15 0.2 0.25 0.3 0.35 0.4 0.5 0.6 0.7 0.8 0.9; do
    LOG_FILE=log_${i}.txt
    echo -n "Initial similarity ${i} ... "
    ${CURDIR}/${TARGET} -n ${N_NEURONS} -p ${N_PATTERNS} \
             -i ${N_ITERATIONS} -s ${i} -c ${SELF_CONNECT} \
             -f ${LOGDIR}/${LOG_FILE}
    echo "done"
done