Created
February 27, 2014 10:43
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#!/bin/bash | |
#Author: tckb <[email protected]> | |
# Parallizing OSRA evaluation using GNU Parallel | |
# Usuage ./eval_dataset_faster.sh [ dataset directory with "images" dir and "sdf" dir] | |
eval_dir=$1 | |
checkingJar='/Users/tckb/Projects/Vishal/OSRAChem/dist/OSRAChem.jar' | |
pass=0 | |
fail=0 | |
unclear=0 | |
total=0 | |
echo "### Parallizing OSRA using PARALLEL" | |
ls $eval_dir/images/*.tif | parallel --eta --no-notice -j+50 'convert -resize 200% {.}.tif {.}_enh.tif ; osra {.}_enh.tif > {.}.sml;' | |
echo "### Finished" | |
rm $eval_dir/images/*_enh.tif | |
echo "### Comparing SMILE" | |
for f in `ls $eval_dir/images/*.sml` | |
do | |
echo Checking $f ... | |
smile=`cat $f` | |
#echo $smile | |
# echo smile for $f is `cat $f.sm` | |
file=`echo $f | awk '{split($0,array,"/")} END{print array[3]}'` | |
sdfFile=$eval_dir/sdf/`echo $file | awk '{split($0,array,".")} END{print array[1]}'`.sdf; | |
#echo $sdfFile | |
echo Checking... | |
java -jar $checkingJar "$smile" $sdfFile 1>$f.res | |
res=`cat $f.res` | |
#echo "result: "$res | |
if [[ $res -eq 1 ]]; then | |
pass=`expr $pass + 1` | |
else | |
if [[ $res -eq 0 ]]; then | |
fail=`expr $fail + 1` | |
else | |
unclear=`expr $unclear + 1` | |
fi | |
fi | |
total=`expr $total + 1` | |
echo "## RES pass=$pass fail=$fail unclear=$unclear total=$total" | |
rm $f.res | |
done | |
echo "### Finished" | |
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