togovar

json2ld-context.json

{
	"@context": [
		"https://schema.org/docs/jsonldcontext.json",
		{
			"@vocab": "http://togovar.biosciencedbc.jp/ontology/",
			"tgv": "http://togovar.biosciencedbc.jp/ontology/",
      "dcterms": "http://purl.org/dc/terms/",
      "m2r": "http://med2rdf.org/ontology/med2rdf",
      "faldo": "http://biohackathon.org/resource/faldo#",
      "obo": "http://purl.obolibrary.org/obo/",
      "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#",
      "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
			"tgv_id": {
				"@id": "dcterms:identifier"
			},
			"variant_type": {
				"@id": "rdf:type"
			},
			"chromosome": {
				"@id": "tgv:chromosome"
			},
			"chromosome_sort": {
				"@id": "tgv:chromosome_sort"
			},
			"start": {
				"@id": "tgv:start"
			},
			"stop": {
				"@id": "tgv:stop"
			},
			"reference": {
				"@id": "m2r:reference_allele"
			},
			"alternative": {
				"@id": "m2r:alternative_allele"
			},
			"vcf": {
				"@id": "tgv:vcf"
			},
			"position": {
				"@id": "faldo:position"
			},
			"existing_variations": {
				"@id": "rdfs:seeAlso"
			},
			"hgvs_g": {
				"@id": "rdfs:label"
			},
			"most_severe_consequence": {
				"@id": "tgv:mostSevereConsequence"
			},
			"transcripts": {
				"@id": "tgv:transcripts"
			},
			"consequences": {
				"@id": "rdf:type"
			},
			"gene_id": {
				"@id": "tgv:gene"
			},
			"transcript_id": {
				"@id": "tgv:transcript"
			},
			"hgnc_id": {
				"@id": "tgv:hgnc_id"
			},
			"symbol": {
				"@id": "rdfs:label"
			},
			"symbol_source": {
				"@id": "tgv:symbol_source"
			},
			"hgvs_c": {
				"@id": "rdfs:label"
			},
			"hgvs_p": {
				"@id": "tgv:hgvs_p"
			},
			"sift": {
				"@id": "tgv:sift"
			},
			"polyphen": {
				"@id": "tgv:polyphen"
			},
			"frequencies": {
				"@id": "tgv:hasFrequency"
			},
			"filter": {
				"@id": "tgv:filter"
			},
			"num_ref_alleles": {
				"@id": "tgv:numRefAlleles"
			},
			"source": {
				"@id": "dcterms:source"
			},
			"num_alleles": {
				"@id": "tgv:numAlleles"
			},
			"num_alt_alleles": {
				"@id": "tgv:numAltAlleles"
			},
			"frequency": {
				"@id": "tgv:frequency"
			},
			"quality": {
				"@id": "tgv:quality"
			},
			"num_genotype_alt_homo": {
				"@id": "tgv:numGenotypeAltHomo"
			},
			"num_genotype_hetero": {
				"@id": "tgv:numGenotypeHetero"
			},
			"num_genotype_ref_homo": {
				"@id": "tgv:numGenotypeRefHomo"
			},
			"conditions": {
				"@id": "tgv:conditions"
			},
			"vcv": {
				"@id": "tgv:vcv"
			},
			"condition": {
				"@id": "tgv:condition"
			},
			"medgen": {
				"@id": "tgv:medgen"
			},
			"rcv": {
				"@id": "tgv:rcv"
			},
			"interpretations": {
				"@id": "tgv:interpretations"
			}
		}
	]
}