Created
August 13, 2014 02:50
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Example trait file for examples/nexus/Flu.nex included with BEAST 2.
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| traits time | |
| TREESPARROW_HENAN_1_2004 1 | |
| HUMAN_VIETNAM_CL105_2005 2 | |
| TREESPARROW_HENAN_4_2004 3 | |
| CHICKEN_HEBEI_326_2005 4 | |
| CHICKEN_HONGKONG_915_1997 5 | |
| VIETNAM_3062_2004 6 | |
| GOOSE_HONGKONG_W355_1997 7 | |
| DUCK_HONGKONG_Y283_1997 8 | |
| DUCK_VIETNAM_376_2005 9 | |
| MALLARD_VIETNAM_16_2003 10 | |
| CHICKEN_THAILAND_KANCHANABURI_CK_160_2005 11 | |
| DUCK_GUANGZHOU_20_2005 12 | |
| CK_HK_WF157_2003 13 | |
| SWINE_ANHUI_2004 14 | |
| DUCK_VIETNAM_272_2005 15 | |
| HONGKONG_1997_1998 16 | |
| GOOSE_SHANTOU_2216_2005 17 | |
| TREESPARROW_HENAN_3_2004 18 | |
| PEREGRINEFALCON_HK_D0028_2004 19 | |
| TREESPARROW_HENAN_2_2004 20 | |
| HONGKONG_538_1997 2 |
Hi Alexei, I was just trying to illustrate a way of getting non-zero tip heights from a file - not any particular dates. (Scarpino's not interested in the Flu data anyway.) Scarpino, unfortunately pasting into gist has stripped out the tabs somehow, so this doesn't work. If you have a text file with tabs separating the two columns and a header up the top, it should work though. (Indeed this one did work, prior to it being mangled by my web browser!)
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I wasn't able to use the guess dates, from file option using either of these trait files and the flu.nex example.