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Install basic nanopore software
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| #Install MinKNOW | |
| sudo apt-get update | |
| sudo apt-get install wget | |
| wget -O- https://mirror.oxfordnanoportal.com/apt/ont-repo.pub | sudo apt-key add - | |
| echo "deb http://mirror.oxfordnanoportal.com/apt bionic-stable non-free" | sudo tee /etc/apt/sources.list.d/nanoporetech.sources.list | |
| sudo apt-get update | |
| sudo apt-get install minion-nc | |
| #Install Guppy | |
| GUPPY=ont-guppy_3.4.5_linux64.tar.gz | |
| sudo wget -O /opt/${GUPPY} https://mirror.oxfordnanoportal.com/software/analysis/${GUPPY} | |
| sudo tar xvzf /opt/${GUPPY} | |
| echo 'PATH=/opt/ont-guppy/bin:$PATH' >> ~/.bashrc | |
| sudo rm /opt/${GUPPY} |
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