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@thanhleviet
Last active February 5, 2020 11:09
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Install basic nanopore software
#Install MinKNOW
sudo apt-get update
sudo apt-get install wget
wget -O- https://mirror.oxfordnanoportal.com/apt/ont-repo.pub | sudo apt-key add -
echo "deb http://mirror.oxfordnanoportal.com/apt bionic-stable non-free" | sudo tee /etc/apt/sources.list.d/nanoporetech.sources.list
sudo apt-get update
sudo apt-get install minion-nc
#Install Guppy
GUPPY=ont-guppy_3.4.5_linux64.tar.gz
sudo wget -O /opt/${GUPPY} https://mirror.oxfordnanoportal.com/software/analysis/${GUPPY}
sudo tar xvzf /opt/${GUPPY}
echo 'PATH=/opt/ont-guppy/bin:$PATH' >> ~/.bashrc
sudo rm /opt/${GUPPY}
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