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thejohnhoffer / index.html
Last active April 4, 2022 17:20
Custom auto-hyperlink tables in Minerva Story
<!DOCTYPE html>
<html lang="en-US" class="h-100">
<head>
<meta charset='utf-8'>
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1">
</head>
<body>
@thejohnhoffer
thejohnhoffer / use-hash-history.md
Last active December 22, 2021 09:52

[Return to the template][HOME]

This replaces a feature that react-router-dom@6 lost in the upgrade from history@4 to history@5. Basically, this restores the ability to have a window.location.hash of #something instead of #/something.

In response to a core React Router dev's suggestion, @jtojnar showed that basename="" doesn't match the old hashType="noslash" feature. I asked for that option as a new feature, and I [implemented it][2]. This was closed, so I tried a sencod implementation, which also was not accpeted.

My third attempt involved two repositories, history and React Router. I added a hashRoot parameter to replicate the old hashType behavior in history. A react rou

@thejohnhoffer
thejohnhoffer / barchart.csv
Last active March 23, 2021 17:43
Example CSV files for infovis data
type frequency
Tumor 23000
Stroma 25000
Immune 32000
Other 28000
@thejohnhoffer
thejohnhoffer / metadata.py
Created August 14, 2018 20:02
''' Create imgData result from metadata.xml
'''
from functools import reduce
import xml.etree.ElementTree as ET
import json
XSD = {
'ome': 'http://www.openmicroscopy.org/Schemas/OME/2016-06'
}
@thejohnhoffer
thejohnhoffer / composite_s3.py
Created July 26, 2018 18:42
from warnings import warn
from multiprocessing.pool import ThreadPool
from io import BytesIO
import numpy as np
import boto3
import cv2
import os
######
# Copyright (C) 2011, the scikit-image team
@thejohnhoffer
thejohnhoffer / crop.py
Last active August 21, 2018 16:00
''' Test to crop all tiles in a region
'''
import argparse
import pathlib
import urllib
import struct
import json
import sys
import ssl
import re
@thejohnhoffer
thejohnhoffer / find_combos.py
Last active March 15, 2017 14:10
Find combos of attributes each with any possible number of values
# coding: utf-8
import numpy as np
bases = [2,3,5,3]
nb = len(bases)
rnb = range(nb)
# Get scale factors
def get_scale(i):
@thejohnhoffer
thejohnhoffer / notebook_importing.py
Created January 4, 2017 16:24 — forked from robclewley/notebook_importing.py
Module to import from ipython notebooks
"""
Module directly collated from
http://nbviewer.ipython.org/github/adrn/ipython/blob/1.x/examples/notebooks/Importing%20Notebooks.ipynb
"""
import io, os, sys, types
from IPython.nbformat import current
from IPython.core.interactiveshell import InteractiveShell
def find_notebook(fullname, path=None):
"""find a notebook, given its fully qualified name and an optional path