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December 9, 2020 18:23
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Animating Elephant Seal movement
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library(sf) | |
library(ggplot2) | |
library(gganimate) | |
# Data from personal correspondance | |
# Collapse all dates to the same year | |
d$year <- format(d$date, '%Y') | |
d$stand_time <- as.POSIXct(paste0('2000-', format(d$date, '%m-%d %T'))) | |
# Create topo background | |
earth <- st_as_sf(rnaturalearth::countries110) | |
lon_range <- range(d$lon) + c(-20, 20) | |
lat_range <- range(d$lat) + c(-20, 20) | |
bbox <- st_polygon(list(cbind(lon_range[c(1,1,2,2,1)], lat_range[c(1,2,2,1,1)]))) | |
bbox <- st_sfc(bbox) | |
st_crs(bbox) <- st_crs(earth) | |
area <- st_intersection(earth, bbox) | |
# Plot and animate | |
p <- ggplot(d) + | |
geom_sf(data = area, fill = 'white') + | |
geom_point(aes(lon, lat, group = id, colour = year), size = 2.5) + | |
coord_sf(xlim = range(d$lon), ylim = range(d$lat)) + | |
labs(title = 'Tracking of southern elephant seals over the year', | |
subtitle = 'Date: {format(frame_time, "%b %e")}', | |
x = NULL, y = NULL) + | |
theme(panel.background = element_rect(fill = 'lightblue'), | |
legend.position = 'bottom') + | |
transition_components(stand_time) + | |
shadow_trail(distance = 0.01, size = 0.3) | |
animate(p, 200, 10) |
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Hi Thomas,
I have a subset of this data (it is in the SOmap package) and when I try and repeat this I get the error:
animate(p, 200, 10)
Error in mapply(FUN = f, ..., SIMPLIFY = FALSE) :
zero-length inputs cannot be mixed with those of non-zero length