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Code and exercises for the celebRation2020 ggplot2 workshop
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--- | |
title: "ggplot2 examples and exercises" | |
output: html_document | |
--- | |
```{r setup, include=FALSE} | |
knitr::opts_chunk$set(echo = TRUE) | |
``` | |
This document contains all the code that is displayed during the workshop. The | |
document is an RMarkdown document which means that it can be compiled, along | |
with the code chunks thus executing and capturing the output of the code within | |
the document. To read more about RMarkdown see the website for the package, as | |
well as the [Get Started](https://rmarkdown.rstudio.com/lesson-1.html) guide. | |
### Exercises | |
While it is encouraged to follow along in this document as the workshop | |
progresses and execute the code to see the result, an important part is also to | |
experiment and play, thus learning how the different settings affect the output. | |
The document will contain code chunks with the code examples discussed during | |
the talk, but it will also contain chunks intended for completing small | |
exercises. These will use the examples as a starting point and ask you to modify | |
the code to achieve a given output. Completing these are optional, but highly | |
recommended, either during or after the workshop. | |
### Dependencies | |
This document comes with a list of required packages. | |
```{r, echo=FALSE} | |
packages <- c( | |
'ggrepel', | |
'patchwork', | |
'ggraph', | |
'dplyr', | |
'patchwork', | |
'gganimate', | |
'gifski', | |
'ggrepel', | |
'ggforce', | |
'ggraph', | |
'ggthemes', | |
'maps', | |
'sf', | |
'tidyr', | |
'concaveman' | |
) | |
# Uncomment the next lines (remove the first #) to install the packages | |
# install.packages('remotes') | |
# remotes::install_github('tidyverse/[email protected]') | |
# remotes::install_github("hrbrmstr/hrbrthemes") | |
# install.packages(packages) | |
# Load standard packages | |
library(ggplot2) | |
``` | |
### Datasets | |
We will use an assortment of datasets throughout the document. The purpose is | |
mostly to showcase different plots, and less on getting some divine insight into | |
the world. While not necessary we will call `data(<dataset>)` before using a new | |
dataset to indicate the introduction of a new dataset. | |
## Introduction | |
We will look at the basic ggplot2 use using the faithful dataset, giving | |
information on the eruption pattern of the Old Faithful geyser in Yellowstone | |
National Park. | |
```{r} | |
data("faithful") | |
# Basic scatterplot | |
ggplot(data = faithful, | |
mapping = aes(x = eruptions, y = waiting)) + | |
geom_point() | |
# Data and mapping can be given both as global (in ggplot()) or per layer | |
ggplot() + | |
geom_point(mapping = aes(x = eruptions, y = waiting), | |
data = faithful) | |
``` | |
If an aesthetic is linked to data it is put into `aes()` | |
```{r} | |
ggplot(faithful) + | |
geom_point(aes(x = eruptions, y = waiting, colour = eruptions < 3)) | |
``` | |
If you simple want to set it to a value, put it outside of `aes()` | |
```{r} | |
ggplot(faithful) + | |
geom_point(aes(x = eruptions, y = waiting), | |
colour = 'steelblue') | |
``` | |
Some geoms only need a single mapping and will calculate the rest for you | |
```{r} | |
ggplot(faithful) + | |
geom_histogram(aes(x = eruptions)) | |
``` | |
geoms are drawn in the order they are added. The point layer is thus drawn on | |
top of the density contours in the example below. | |
```{r} | |
ggplot(faithful, aes(x = eruptions, y = waiting)) + | |
geom_density_2d() + | |
geom_point() | |
``` | |
#### Exercise | |
Modify the code below to make the points larger squares and slightly transparent. | |
See `?geom_point` for more information on the point layer. | |
```{r} | |
ggplot(faithful) + | |
geom_point(aes(x = eruptions, y = waiting)) | |
``` | |
Hint 1: transparency is controlled with `alpha`, and shape with `shape` | |
Hint 2: rememberthe difference between mapping and setting aesthetics | |
* * * | |
Colour the two distributions in the histogram with different colours | |
```{r} | |
ggplot(faithful) + | |
geom_histogram(aes(x = eruptions)) | |
``` | |
Hint 1: For polygons you can map two different colour-like aesthetics: `colour` | |
(the colour of the stroke) and `fill` (the fill colour) | |
* * * | |
Colour the distributions in the histogram by whether `waiting` is above or below | |
`60`. What happens? | |
```{r} | |
ggplot(faithful) + | |
geom_histogram(aes(x = eruptions)) | |
``` | |
Change the plot above by setting `position = 'dodge'` in `geom_histogram()` | |
(while keeping the colouring by `waiting`). What do `position` control? | |
* * * | |
Add a line that separates the two point distributions. See `?geom_abline` for | |
how to draw straight lines from a slope and intercept. | |
```{r} | |
ggplot(faithful) + | |
geom_point(aes(x = eruptions, y = waiting)) | |
``` | |
### Stat | |
We will use the `mpg` dataset giving information about fuel economy on different | |
car models. | |
Every geom has a stat. This is why new data (`count`) can appear when using | |
`geom_bar()`. | |
```{r} | |
data("mpg") | |
ggplot(mpg) + | |
geom_bar(aes(x = class)) | |
``` | |
The stat can be overwritten. If we have precomputed count we don't want any | |
additional computations to perform and we use the `identity` stat to leave the | |
data alone | |
```{r} | |
library(dplyr) | |
mpg_counted <- mpg %>% | |
count(class, name = 'count') | |
ggplot(mpg_counted) + | |
geom_bar(aes(x = class, y = count), stat = 'identity') | |
``` | |
Most obvious geom+stat combinations have a dedicated geom constructor. The one | |
above is available directly as `geom_col()` | |
```{r} | |
ggplot(mpg_counted) + | |
geom_col(aes(x = class, y = count)) | |
``` | |
Values calculated by the stat is available with the `after_stat()` function | |
inside `aes()`. You can do all sorts of computations inside that. | |
```{r} | |
ggplot(mpg) + | |
geom_bar(aes(x = class, y = after_stat(100 * count / sum(count)))) | |
``` | |
Many stats provide multiple variations of the same calculation, and provides a | |
default (here, `density`) | |
```{r} | |
ggplot(mpg) + | |
geom_density(aes(x = hwy)) | |
``` | |
While the others must be used with the `after_stat()` function | |
```{r} | |
ggplot(mpg) + | |
geom_density(aes(x = hwy, y = after_stat(scaled))) | |
``` | |
#### Exercises | |
While most people use `geom_*()` when adding layers, it is just as valid to add | |
a `stat_*()` with an attached geom. Look at `geom_bar()` and figure out which | |
stat it uses as default. Then modify the code to use the stat directly instead | |
(i.e. adding `stat_*()` instead of `geom_bar()`) | |
```{r} | |
ggplot(mpg) + | |
geom_bar(aes(x = class)) | |
``` | |
* * * | |
Use `stat_summary()` to add a red dot at the mean `hwy` for each group | |
```{r} | |
ggplot(mpg) + | |
geom_jitter(aes(x = class, y = hwy), width = 0.2) | |
``` | |
Hint: You will need to change the default geom of `stat_summary()` | |
### Scales | |
Scales define how the mapping you specify inside `aes()` should happen. All | |
mappings have an associated scale even if not specified. | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = displ, y = hwy, colour = class)) | |
``` | |
take control by adding one explicitly. All scales follow the same naming | |
conventions. | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = displ, y = hwy, colour = class)) + | |
scale_colour_brewer(type = 'qual') | |
``` | |
Positional mappings (x and y) also have associated scales. | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = displ, y = hwy)) + | |
scale_x_continuous(breaks = c(3, 5, 6)) + | |
scale_y_continuous(trans = 'log10') | |
``` | |
#### Exercises | |
Use `RColorBrewer::display.brewer.all()` to see all the different palettes from | |
Color Brewer and pick your favourite. Modify the code below to use it | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = displ, y = hwy, colour = class)) + | |
scale_colour_brewer(type = 'qual') | |
``` | |
* * * | |
Modify the code below to create a bubble chart (scatterplot with size mapped to | |
a continuous variable) showing `cyl` with size. Make sure that only the present | |
amount of cylinders (4, 5, 6, and 8) are present in the legend. | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = displ, y = hwy, colour = class, size = cyl)) + | |
scale_colour_brewer(type = 'qual') + | |
scale_size_area(breaks = c(4, 5, 6, 8)) | |
``` | |
Hint: The `breaks` argument in the scale is used to control which values are | |
present in the legend. | |
Explore the different types of size scales available in ggplot2. Is the default | |
the most appropriate here? | |
* * * | |
Modify the code below so that colour is no longer mapped to the discrete `class` | |
variable, but to the continuous `cty` variable. What happens to the guide? | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = displ, y = hwy, colour = class, size = cty)) | |
``` | |
* * * | |
The type of guide can be controlled with the `guide` argument in the scale, or | |
with the `guides()` function. Continuous colours have a gradient colour bar by | |
default, but setting it to `legend` will turn it back to the standard look. What | |
happens when multiple aesthetics are mapped to the same variable and uses the | |
guide type? | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = displ, y = hwy, colour = cty, size = cty)) | |
``` | |
### Facets | |
The facet defines how data is split among panels. The default facet | |
(`facet_null()`) puts all the data in a single panel, while `facet_wrap()` and | |
`facet_grid()` allows you to specify different types of small multiples | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = displ, y = hwy)) + | |
facet_wrap(~ class) | |
``` | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = displ, y = hwy)) + | |
facet_grid(year ~ drv) | |
``` | |
#### Exercises | |
One of the great things about facets is that they share the axes between the | |
different panels. Sometimes this is undiserable though, and the behaviour can | |
be changed with the `scales` argument. Experiment with the different possible | |
settings in the plot below: | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = displ, y = hwy)) + | |
facet_wrap(~ drv) | |
``` | |
* * * | |
Usually the space occupied by each panel is equal. This can create problems when | |
different scales are used. Modify the code below so that the y scale differs | |
between the panels in the plot. What happens? | |
```{r} | |
ggplot(mpg) + | |
geom_bar(aes(y = manufacturer)) + | |
facet_grid(class ~ .) | |
``` | |
Use the `space` argument in `facet_grid()` to change the plot above so each bar | |
has the same width again. | |
* * * | |
Facets can be based on multiple variables by adding them together. Try to | |
recreate the same panels present in the plot below by using `facet_wrap()` | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = displ, y = hwy)) + | |
facet_grid(year ~ drv) | |
``` | |
### Coordinates | |
The coordinate system is the fabric you draw your layers on in the end. The | |
default `coord_cartesion provides the standard rectangular x-y coordinate | |
system. Changing the coordinate system can have dramatic effects | |
```{r} | |
ggplot(mpg) + | |
geom_bar(aes(x = class)) + | |
coord_polar() | |
``` | |
```{r} | |
ggplot(mpg) + | |
geom_bar(aes(x = class)) + | |
coord_polar(theta = 'y') + | |
expand_limits(y = 70) | |
``` | |
You can zoom both on the scale... | |
```{r} | |
ggplot(mpg) + | |
geom_bar(aes(x = class)) + | |
scale_y_continuous(limits = c(0, 40)) | |
``` | |
and in the coord. You usually want the latter as it avoids changing the plottet | |
data | |
```{r} | |
ggplot(mpg) + | |
geom_bar(aes(x = class)) + | |
coord_cartesian(ylim = c(0, 40)) | |
``` | |
#### Exercises | |
In the same way as limits can be set in both the positional scale and the coord, | |
so can transformations, using `coord_trans()`. Modify the code below to apply a | |
log transformation to the y axis; first using `scale_y_continuous()`, | |
and then using `coord_trans()`. Compare the results — how do they differ? | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = hwy, y = displ)) | |
``` | |
* * * | |
Coordinate systems are particularly important in cartography. While we will not | |
spend a lot of time with it in this workshop, spatial plotting is well supported | |
in ggplot2 with `geom_sf()` and `coord_sf()` (which interfaces with the sf | |
package). The code below produces a world map. Try changing the `crs` argument | |
in `coord_sf()` to be `'+proj=robin'` (This means using the Robinson projection). | |
```{r} | |
# Get the borders of all countries | |
world <- sf::st_as_sf(maps::map('world', plot = FALSE, fill = TRUE)) | |
world <- sf::st_wrap_dateline(world, | |
options = c("WRAPDATELINE=YES", "DATELINEOFFSET=180"), | |
quiet = TRUE) | |
# Plot code | |
ggplot(world) + | |
geom_sf() + | |
coord_sf(crs = "+proj=moll") | |
``` | |
Maps are a huge area in data visualisation and simply too big to cover in this | |
workshop. If you want to explore further I advice you to explore the | |
[r-spatial wbsite](https://www.r-spatial.org) as well as the website for the | |
[sf package](https://r-spatial.github.io/sf) | |
### Theme | |
Theming defines the feel and look of your final visualisation and is something | |
you will normally defer to the final polishing of the plot. It is very easy to | |
change looks with a prebuild theme | |
```{r} | |
ggplot(mpg) + | |
geom_bar(aes(y = class)) + | |
facet_wrap(~year) + | |
theme_minimal() | |
``` | |
Further adjustments can be done in the end to get exactly the look you want | |
```{r} | |
ggplot(mpg) + | |
geom_bar(aes(y = class)) + | |
facet_wrap(~year) + | |
labs(title = "Number of car models per class", | |
caption = "source: http://fueleconomy.gov", | |
x = NULL, | |
y = NULL) + | |
scale_x_continuous(expand = c(0, NA)) + | |
theme_minimal() + | |
theme( | |
text = element_text('Avenir Next Condensed'), | |
strip.text = element_text(face = 'bold', hjust = 0), | |
plot.caption = element_text(face = 'italic'), | |
panel.grid.major = element_line('white', size = 0.5), | |
panel.grid.minor = element_blank(), | |
panel.grid.major.y = element_blank(), | |
panel.ontop = TRUE | |
) | |
``` | |
#### Exercises | |
Themes can be overwhelming, especially as you often try to optimise for beauty | |
while you learn. To remove the last part of the equation, the exercise is to | |
take the plot given below and make it as hideous as possible using the theme | |
function. Go absolutely crazy, but take note of the effect as you change | |
different settings. | |
```{r} | |
ggplot(mpg) + | |
geom_bar(aes(y = class, fill = drv)) + | |
facet_wrap(~year) + | |
labs(title = "Number of car models per class", | |
caption = "source: http://fueleconomy.gov", | |
x = 'Number of cars', | |
y = NULL) | |
``` | |
## Extensions | |
While ggplot2 comes with a lot of batteries included, the extension ecosystem | |
provides priceless additinal features | |
### Plot composition | |
We start by creating 3 separate plots | |
```{r} | |
p1 <- ggplot(msleep) + | |
geom_boxplot(aes(x = sleep_total, y = vore, fill = vore)) | |
p1 | |
``` | |
```{r} | |
p2 <- ggplot(msleep) + | |
geom_bar(aes(y = vore, fill = vore)) | |
p2 | |
``` | |
```{r} | |
p3 <- ggplot(msleep) + | |
geom_point(aes(x = bodywt, y = sleep_total, colour = vore)) + | |
scale_x_log10() | |
p3 | |
``` | |
Combining them with patchwork is a breeze using the different operators | |
```{r} | |
library(patchwork) | |
p1 + p2 + p3 | |
(p1 | p2) / | |
p3 | |
p_all <- (p1 | p2) / | |
p3 | |
p_all + plot_layout(guides = 'collect') | |
p_all & theme(legend.position = 'none') | |
p_all <- p_all & theme(legend.position = 'none') | |
p_all + plot_annotation( | |
title = 'Mammalian sleep patterns', | |
tag_levels = 'A' | |
) | |
``` | |
#### Excercises | |
Patchwork will assign the same amount of space to each plot by default, but this | |
can be controlled with the `widths` and `heights` argument in `plot_layout()`. | |
This can take a numeric vector giving their relative sizes (e.g. `c(2, 1)` will | |
make the first plot twice as big as the second). Modify the code below so that | |
the middle plot takes up half of the total space: | |
```{r} | |
p <- ggplot(mtcars) + | |
geom_point(aes(x = disp, y = mpg)) | |
p + p + p | |
``` | |
* * * | |
The `&` operator can be used with any type of ggplot2 object, not just themes. | |
Modify the code below so the two plots share the same y-axis (same limits) | |
```{r} | |
p1 <- ggplot(mtcars[mtcars$gear == 3,]) + | |
geom_point(aes(x = disp, y = mpg)) | |
p2 <- ggplot(mtcars[mtcars$gear == 4,]) + | |
geom_point(aes(x = disp, y = mpg)) | |
p1 + p2 | |
``` | |
* * * | |
Patchwork contains many features for fine tuning the layout and annotation. Very | |
complex layouts can be obtained by providing a design specification to the | |
`design` argument in `plot_layout()`. The design can be defined as a textual | |
representation of the cells. Use the layout given below. How should the textual | |
representation be undertood. | |
```{r} | |
p1 <- ggplot(mtcars) + | |
geom_point(aes(x = disp, y = mpg)) | |
p2 <- ggplot(mtcars) + | |
geom_bar(aes(x = factor(gear))) | |
p3 <- ggplot(mtcars) + | |
geom_boxplot(aes(x = factor(gear), y = mpg)) | |
layout <- ' | |
AA# | |
#BB | |
C## | |
' | |
p1 + p2 + p3 + plot_layout(design = layout) | |
``` | |
### Animation | |
ggplot2 is usually focused on static plots, but gganimate extends the API and | |
grammar to describe animations. As such it feels like a very natural extension | |
of using ggplot2 | |
```{r} | |
ggplot(economics) + | |
geom_line(aes(x = date, y = unemploy)) | |
library(gganimate) | |
ggplot(economics) + | |
geom_line(aes(x = date, y = unemploy)) + | |
transition_reveal(along = date) | |
``` | |
There are many different transitions that control how data is interpreted for | |
animation, as well as a range of other animation specific features | |
```{r} | |
ggplot(mpg) + | |
geom_bar(aes(x = factor(cyl))) | |
ggplot(mpg) + | |
geom_bar(aes(x = factor(cyl))) + | |
labs(title = 'Number of cars in {closest_state} by number of cylinders') + | |
transition_states(states = year) + | |
enter_grow() + | |
exit_fade() | |
``` | |
#### Exercises | |
The animation below will animate between points showing cars with different | |
cylinders. | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = displ, y = hwy)) + | |
ggtitle("Cars with {closest_state} cylinders") + | |
transition_states(factor(cyl)) | |
``` | |
gganimate uses the `group` aesthetic to match observations between states. By | |
default the group aesthetic is set to the same value, so observations are | |
matched by their position (first row of 4 cyl is matched to first row of 5 cyl | |
etc.). This is clearly wrong here (why?). Add a mapping to the `group` aesthetic | |
to ensure that points do not move between the different states. | |
* * * | |
In the presence of discrete aesthetic mappings (`colour` below), the group is | |
deduced if not given. The default behaviour of objects that appear and disappear | |
during the animation is to simply pop in and out of existance. `enter_*()` and | |
`exit_*()` functions can be used to control this behaviour. Experiment with the | |
different enter and exit functions provided by gganimate below. What happens if | |
you add multiple enter or exit functions to the same animation? | |
```{r} | |
ggplot(mpg) + | |
geom_point(aes(x = displ, y = hwy, colour = factor(cyl))) + | |
ggtitle("Cars with {closest_state} cylinders") + | |
transition_states(factor(cyl)) | |
``` | |
* * * | |
In the animation below (as in all the other animations) the changes happens at | |
constant speed. How values change during an animation is called easing and can | |
be controlled using the `ease_aes()` function. Read the documentation for | |
`ease_aes()` and experiment with different easings in the animation. | |
```{r} | |
mpg2 <- tidyr::pivot_longer(mpg, c(cty,hwy)) | |
ggplot(mpg2) + | |
geom_point(aes(x = displ, y = value)) + | |
ggtitle("{if (closest_state == 'cty') 'Efficiency in city' else 'Efficiency on highway'}") + | |
transition_states(name) | |
``` | |
### Annotation | |
Text is a huge part of storytelling with your visualisation. Historically, | |
textual annotations has not been the best part of ggplot2 but new extensions | |
make up for that. | |
Standard geom_text will often result in overlaping labels | |
```{r} | |
ggplot(mtcars, aes(x = disp, y = mpg)) + | |
geom_point() + | |
geom_text(aes(label = row.names(mtcars))) | |
``` | |
ggrepel takes care of that | |
```{r} | |
library(ggrepel) | |
ggplot(mtcars, aes(x = disp, y = mpg)) + | |
geom_point() + | |
geom_text_repel(aes(label = row.names(mtcars))) | |
``` | |
If you want to highlight certain parts of your data and describe it, the | |
`geom_mark_*()` family of geoms have your back | |
```{r} | |
library(ggforce) | |
ggplot(mtcars, aes(x = disp, y = mpg)) + | |
geom_point() + | |
geom_mark_ellipse(aes(filter = gear == 4, | |
label = '4 gear cars', | |
description = 'Cars with fewer gears tend to both have higher yield and lower displacement')) | |
``` | |
#### Exercises | |
ggrepel has a tonne of settings for controlling how text labels move. Often, | |
though, the most effective is simply to not label everything. There are two | |
strategies for that: Either only use a subset of the data for the repel layer, | |
or setting the label to `""` for those you don't want to plot. Try both in the | |
plot below where you only label 10 random points. | |
```{r} | |
mtcars2 <- mtcars | |
mtcars2$label <- rownames(mtcars2) | |
points_to_label <- sample(nrow(mtcars), 10) | |
ggplot(mtcars2, aes(x = disp, y = mpg)) + | |
geom_point() + | |
geom_text_repel(aes(label = label)) | |
``` | |
* * * | |
Explore the documentation for `geom_text_repel`. Find a way to ensure that the | |
labels in the plot below only repels in the vertical direction | |
```{r} | |
mtcars2$label <- "" | |
mtcars2$label[1:10] <- rownames(mtcars2)[1:10] | |
ggplot(mtcars2, aes(x = disp, y = mpg)) + | |
geom_point() + | |
geom_text_repel(aes(label = label)) | |
``` | |
* * * | |
ggforce comes with 4 different types of mark geoms. Try them all out in the code | |
below: | |
```{r} | |
ggplot(mtcars, aes(x = disp, y = mpg)) + | |
geom_point() + | |
geom_mark_ellipse(aes(filter = gear == 4, | |
label = '4 gear cars')) | |
``` | |
### Networks | |
ggplot2 has been focused on tabular data. Network data in any shape and form is | |
handled by ggraph | |
```{r} | |
library(ggraph) | |
library(tidygraph) | |
graph <- create_notable('zachary') %>% | |
mutate(clique = as.factor(group_infomap())) | |
ggraph(graph) + | |
geom_mark_hull(aes(x, y, fill = clique)) + | |
geom_edge_link() + | |
geom_node_point(size = 2) | |
``` | |
dendrograms are just a specific type of network | |
```{r} | |
iris_clust <- hclust(dist(iris[, 1:4])) | |
ggraph(iris_clust) + | |
geom_edge_bend() + | |
geom_node_point(aes(filter = leaf)) | |
``` | |
#### Exercies | |
Most network plots are defined by a layout algorithm, which takes the network | |
structure and calculate a position for each node. The layout algorithm is | |
global and set in the `ggraph()`. The default `auto` layout will inspect the | |
network object and try to choose a sensible layout for it (e.g. dendrogram for a | |
hierarchical clustering as above). There is, however no optimal layout and it is | |
often a good idea to try out different layouts. Try out different layouts in the | |
graph below. See the [the website](https://ggraph.data-imaginist.com/reference/index.html) | |
for an overview of the different layouts. | |
```{r} | |
ggraph(graph) + | |
geom_edge_link() + | |
geom_node_point(aes(colour = clique), size = 3) | |
``` | |
* * * | |
There are many different ways to draw edges. Try to use `geom_edge_parallel()` | |
in the graph below to show the presence of multiple edges | |
```{r} | |
highschool_gr <- as_tbl_graph(highschool) | |
ggraph(highschool_gr) + | |
geom_edge_link() + | |
geom_node_point() | |
``` | |
Faceting works in ggraph as it does in ggplot2, but you must choose to facet by | |
either nodes or edges. Modify the graph below to facet the edges by the `year` | |
variable (using `facet_edges()`) | |
```{r} | |
ggraph(highschool_gr) + | |
geom_edge_fan() + | |
geom_node_point() | |
``` | |
### Looks | |
Many people have already desgned beautiful (and horrible) themes for you. Use | |
them as a base | |
```{r} | |
p <- ggplot(mtcars, aes(mpg, wt)) + | |
geom_point(aes(color = factor(carb))) + | |
labs( | |
x = 'Fuel efficiency (mpg)', | |
y = 'Weight (tons)', | |
title = 'Seminal ggplot2 example', | |
subtitle = 'A plot to show off different themes', | |
caption = 'Source: It’s mtcars — everyone uses it' | |
) | |
library(hrbrthemes) | |
p + | |
scale_colour_ipsum() + | |
theme_ipsum() | |
``` | |
```{r} | |
library(ggthemes) | |
p + | |
scale_colour_excel() + | |
theme_excel() | |
``` | |
## Drawing anything | |
```{r} | |
states <- c( | |
'eaten', "eaten but said you didn\'t", 'cat took it', 'for tonight', | |
'will decompose slowly' | |
) | |
pie <- data.frame( | |
state = factor(states, levels = states), | |
amount = c(4, 3, 1, 1.5, 6), | |
stringsAsFactors = FALSE | |
) | |
ggplot(pie) + | |
geom_col(aes(x = 0, y = amount, fill = state)) | |
``` | |
```{r} | |
ggplot(pie) + | |
geom_col(aes(x = 0, y = amount, fill = state)) + | |
coord_polar(theta = 'y') | |
``` | |
```{r} | |
ggplot(pie) + | |
geom_col(aes(x = 0, y = amount, fill = state)) + | |
coord_polar(theta = 'y') + | |
scale_fill_tableau(name = NULL, | |
guide = guide_legend(ncol = 2)) + | |
theme_void() + | |
theme(legend.position = 'top', | |
legend.justification = 'left') | |
``` | |
```{r} | |
ggplot(pie) + | |
geom_arc_bar(aes(x0 = 0, y0 = 0, r0 = 0, r = 1, amount = amount, fill = state), stat = 'pie') + | |
coord_fixed() | |
``` | |
```{r} | |
ggplot(pie) + | |
geom_arc_bar(aes(x0 = 0, y0 = 0, r0 = 0, r = 1, amount = amount, fill = state), stat = 'pie') + | |
coord_fixed() + | |
scale_fill_tableau(name = NULL, | |
guide = guide_legend(ncol = 2)) + | |
theme_void() + | |
theme(legend.position = 'top', | |
legend.justification = 'left') | |
``` | |
```{r} | |
ggplot(mpg) + | |
# geom_bar(aes(x = hwy), stat = 'bin') | |
geom_histogram(aes(x = hwy)) | |
``` | |
```{r} | |
ggplot(mpg) + | |
geom_bar(aes(x = hwy)) + | |
scale_x_binned(n.breaks = 30, guide = guide_axis(n.dodge = 2)) | |
``` |
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