biostars.org_ 352930. "readX" could be the first read (A00223:8:H7YG3DMXX:1:1101:8892:7623)

gistfile1.txt

@SQ	SN:chrM	LN:16571
@SQ	SN:chr1	LN:249250621
@SQ	SN:chr2	LN:243199373
@SQ	SN:chr3	LN:198022430
@SQ	SN:chr4	LN:191154276
@SQ	SN:chr5	LN:180915260
@SQ	SN:chr6	LN:171115067
@SQ	SN:chr7	LN:159138663
@SQ	SN:chr8	LN:146364022
@SQ	SN:chr9	LN:141213431
@SQ	SN:chr10	LN:135534747
@SQ	SN:chr11	LN:135006516
@SQ	SN:chr12	LN:133851895
@SQ	SN:chr13	LN:115169878
@SQ	SN:chr14	LN:107349540
@SQ	SN:chr15	LN:102531392
@SQ	SN:chr16	LN:90354753
@SQ	SN:chr17	LN:81195210
@SQ	SN:chr18	LN:78077248
@SQ	SN:chr19	LN:59128983
@SQ	SN:chr20	LN:63025520
@SQ	SN:chr21	LN:48129895
@SQ	SN:chr22	LN:51304566
@SQ	SN:chrX	LN:155270560
@SQ	SN:chrY	LN:59373566
@RG	ID:INV_4SMALL_Aug_17_2017_1	SM:0X	PL:ILLUMINA	LB:libeX
@PG	ID:bwa	PN:bwa	VN:0.7.17-r1188	CL:bwa mem -t 12 -R @RG\tID:sample1\tSM:0X\tPL:ILLUMINA\tLB:libeX -Y -a -k 11 -O 2 -B 1 -A 20 hg19_canonical_PARmaskedonchrY.fasta R1.fastq
A00223:8:H7YG3DMXX:1:1101:8892:7623	0	chr7	6776845	7	151M	*	0	0	ACACAACAGAGAACAAGCCTCACAGCCCAAAGACTCCAGAACCAAGAAGGAGCCCTCTAGGACAGAAAAGGGGTATGTCGTCTTCTAGCACTTCAGATGCCATCTCTGACAAAGGCGTCCTGAGACCCCAGAAAGAGGCAGTGAGTTCCAG	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:	NM:i:1	MD:Z:127T23	AS:i:2999	XS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:8892:7623	272	chr7	6026963	0	151M	*	0	0	*	*	NM:i:4	MD:Z:23A30C17A0G77	AS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:15338:10113	16	chr7	6026731	4	151M	*	0	0	CTGGTTTGAATGGCAGTCCACATCTGAAAAAGAGTCGTCAGTTTCAGGCGCTTTCTCCTGAGAGTCCACATGTTCCTGCGAGCCCCTGTCCCCTGGGGAGCTGGCCGCATACTCGCTGCTGCAGTGACTGCCCGTGTCTGGGATGCTGAAC	,FF,FFFF,FFF,FF,F,FF,:F,,:,FFF,F::FFFF:FFFFF,,::,:FFFF,F:FFFFFF:F,FF,FFFFF:FFF,FFFFFFFFFF:,FFF:F,FFFFFFFFFFFFFFFFFFFFFFF,F::F:F,F:FFFFFFFFFFFF,F,FFFFF,	NM:i:1	MD:Z:44T106	AS:i:2999	XS:i:2957	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:15338:10113	256	chr7	6777077	0	151M	*	0	0	*	*	NM:i:3	MD:Z:41G2T7A98	AS:i:2957	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:15881:12242	0	chr7	6026908	11	151M	*	0	0	GTGCCCCGAGTCCTTCTCCACCTCCGCTCTGTCCGTAGGGTCACTGGGTCCGTGACTGGAACTCACTGCCTCTTTCTGAGATCTCAGGACGCCTTTGTCAGAGATGGCACCTGAAGTGCTAGAAGACAGCATACCCCTTTTCTGTCCTAGA	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF,F:FFFFFFFFFFF:F,FFFFFFFFFFFFFFF:FFFFFFFFF:FF:FFF:FFFF:FFFFFFFF,FFFFFFFFF	NM:i:1	MD:Z:80G70	AS:i:2999	XS:i:2895	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:15881:12242	272	chr7	6776900	0	151M	*	0	0	*	*	NM:i:6	MD:Z:22T0C17A28C28G50T0	AS:i:2895	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:16224:15687	0	chr7	6026873	7	151M	*	0	0	ATGCTGAACCCCTCAGAATCCACGGAAGTGCTGCCGTGCCCCGAGTCCTTCTCCACCTCCGCTCTGTCCGTAGGGTCACTGGGTCCGTGACTGGAACTCACTGCCTCTTTCTGAGATCTCAGGACGCCTTTGTCAGAGATGGCACCTGAAG	F,FFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFF:F:FFFF:FFFFFFFFFFFFFFFF,FFFFF::FFFFFFFFFFFFFFFFFFFFFF:FFFFF,::F:F:F:FFFF:FFFFFFF:,FFF:,FFFF:FFF,F,,FF,F	NM:i:1	MD:Z:115G35	AS:i:2999	XS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:16224:15687	272	chr7	6776935	0	151M	*	0	0	*	*	NM:i:4	MD:Z:6A28C28G50T35	AS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:18810:23171	0	chr7	6791012	5	151M	*	0	0	TCTCAGAACTGACCGTAGTCACTGTATGGAATAATTGGTTTTATCGCAGATTTTTATGTTTTGAAAGACAGAGTCTTCACTAACCTTTTTTGTTTTAAAATGAAACCTGCTACTTAAAAAAAATACACATCACACCCATTTAAAAGTGATC	FFFFFFFFFFFFFFFFFFFF:F:FFFFFFF,FFFF,FFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFF,FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:18810:23171	272	chr7	6012892	0	46M1I104M	*	0	0	*	*	NM:i:1	MD:Z:150	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:18674:32894	16	chr7	6017353	5	151M	*	0	0	GCAAGGAAATCAGTTTAGCCCTTTCAGTGACTGGAGCTAAAAGAATACAATTTTGAGAAAAATCCATGACTTGACAAACACGTTTCACTTGAAAGCTACTTAGGATGAACATCTGAGGCCGGGCGTGGTGGCTCACGCCTGTAATCCCTGC	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FF:FFF::FFFFFFFFFFFF::FFFFF:FF,FFFFFFFFFFFFFFFFFFFFFFF,FFFFFFF:FFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:18674:32894	256	chr7	6786552	0	151M	*	0	0	*	*	NM:i:2	MD:Z:10T4A135	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:4336:33207	0	chr7	6776732	5	151M	*	0	0	GGATTTGGAAAAGCCCATGGTAGAAAAGCAGGATCAATCCCCTTCATTAAGGACTGGAGAAGAAAAAAGGGACGTGTCCATTTCCAGACTGCGAGAGGCCTTTTCTCTTCGTCACACAACAGAGAACAAGCCTCACAGCCCAAAGACTCCA	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFF,FFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:4336:33207	272	chr7	6027076	0	151M	*	0	0	*	*	NM:i:2	MD:Z:81T0T68	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:1163:35383	16	chr7	6027025	9	151M	*	0	0	GCTAGAAGACAGCAGACCCCTTGTCTGTCCTAGAGGGCTCCTTCTTGGTTCTGGAGTCTTTGGGCTGTGAGGCTTGTTCTCTGTTGTGTGACGAAGAGAAAAGGCCTCTCGCAGTCTGGAAATGGACACGTCTTTTTTTTCTTCTCCAGTC	FFFFFFFFFFFFFF,:FFFF,F,FFFFFFFF:FFFFFFFFF:FF::FF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF,FFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFF:FF,FFFFFF	NM:i:2	MD:Z:14T7T128	AS:i:2978	XS:i:2894	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1101:1163:35383	256	chr7	6776783	0	151M	*	0	0	*	*	NM:i:6	MD:Z:17G0G109A7A2T0C10	AS:i:2894	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:7265:1078	16	chr7	6785874	4	151M	*	0	0	CCCAGCACTCTGGGAGGCCAAGGCGGGCAGATCGCCTGAGGTCAGGAGTTTGAGACCAGCCTCGCTAACAGGGTGAAACCCCATCTCTACTGAAAATACAAAAAGTAGCCGGGCCTGGTGGCGGGTGCCTGTAATCCCAGCTACTCAGGNG	F:FF,F:FF:FFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFF,F,:FFFFFF:FF:FFF:FF:FFFFFFFFF:F,FF:F::F:,:FF,FFFFF,FF,FFF::FFFFF:FFFFFFFFFFFFF:F#F	NM:i:2	MD:Z:70T78A1	AS:i:2978	XS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:7265:1078	256	chr7	6018022	0	151M	*	0	0	*	*	NM:i:4	MD:Z:1T34C43A7C62	AS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:11469:1501	0	chr7	6026961	7	151M	*	0	0	GACTGGAACTCACTGCCTCTTTCTGAGATCTCAGGACGCCTTTGTCAGAGATGGCACCTGAAGTGCTAGAAGACAGCATACCCCTTTTCTGTCCTAGAGGGCTCCTTCTTGGTTCTGGAGTCTTTGGGCTGTGAGGCTTGTTCTCTGTTGT	,FF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFF:FF,FF:	NM:i:1	MD:Z:27G123	AS:i:2999	XS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:11469:1501	272	chr7	6776847	0	151M	*	0	0	*	*	NM:i:4	MD:Z:75T0C17A28C27	AS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:4029:1579	0	chr7	6777352	14	151M	*	0	0	ACTCAGAACGTGTCAGCTTCTCAGGTTGATGTAGCTGTGAAAATTAATAAGAAAGTTGTGCCCCTGAACTTTTCTGAGTTCTTTAGCTAAACGAATAAAGCAGTTACATCATGAAGCACAGCAAAGTGAAGGGGAACAGAATTACAGGAAG	F,FFFFFFF:FFFFFFFFFFFFFFFFFFFFF,FFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF,FFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2894	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:4029:1579	272	chr7	6026455	0	76M2D75M	*	0	0	*	*	NM:i:6	MD:Z:76^AT8C48G7T2C6	AS:i:2894	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:9679:25019	16	chr7	6785874	5	151M	*	0	0	CCCAGCACTCTGGGAGGCCAAGGCGGGCAGATCGCCTGAGGTCAGGAGTTTGAGACCAGCCTCGCTAACATGGTGAAACCCCATCTCTACTGAAAATACAAAAAGTAGCCGGGCCTGGTGGCGGGTGCCTGTAATCCCAGCTACTCAGGAG	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:9679:25019	256	chr7	6018022	0	151M	*	0	0	*	*	NM:i:2	MD:Z:36C51C62	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:18014:27899	0	chr7	6781216	0	151M	*	0	0	GTTTTTGTATTGTTTGACTTTTTTTTATTACAGTGTTCTATAACATAATCAGAAAAATAATCTTGTAAAATGTCTGATAATTAACATTTTCTACCTGCAGTAAAACGATGTTTGCAGAAATGGAAATCATTGGTCAGTTTAACCTGGGATT	,,:F:FF,FFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFF:FFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2998	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:18014:27899	272	chr7	6022572	0	125M1D26M	*	0	0	*	*	NM:i:1	MD:Z:125^A26	AS:i:2998	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:8576:28025	0	chr7	6026528	29	151M	*	0	0	CTCATAGAAAAGTCCAGGGGCACAACTTTCTTATTAATTTTCACAGCTACATCAACCTGAGAGGCTGACATGTCCTGAGTATTTACTAACTTTTGACAAATGTCAGAACTGGAAAGAATTTCTTCTTTTTTAAAACGCTTTGTGTTTGGGG	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFF,FFFFFFFFFFFFFFF:FF:FFFFFFFF:,FFFFFFFFFF:,FF,FFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2748	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:8576:28025	272	chr7	6777280	0	10M1D135M2I4M	*	0	0	*	*	NM:i:11	MD:Z:10^A4T7G19A10C23A2G7T48A11	AS:i:2748	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:15600:28416	16	chr7	6777550	60	151M	*	0	0	ACTAAGAAAAGAGATAAGGTAAAGTTTTAATTTTTTACTTTTTATTTTAAATTTGTATTTATTTTTATTTTTTATTTTTTTGAGACAGAATCTTGCTCTGTGCACAGGCTGGAATGCAGTGGCACAATCTTGGCTCACTGCAGCCTCCACC	FF::FFFFFF:F:FFFFFFFF::F:FFFFFFF:FFFFF:FFFFFFFF,FFFFFFFFFFF:F:FFFFFFFFFFF:F::FF:F:FFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:1835	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1102:15600:28416	272	chr11	71648298	0	12M1I37M1D2M3D8M2D40M2D17M4I1M1I2M3I23M	*	0	0	*	*	NM:i:48	MD:Z:0T0T1C2C1C0C0T3C0T0T1C1C3G0G0C0T1G0C0A1G0G1G1A0G6A2^T2^TTA3A1C2^GA40^TT3C9G20A5G2	AS:i:1835	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1103:18584:7216	16	chr7	6026486	22	151M	*	0	0	TGTGCTTCATGATGTAACTGCTTTATTCGTTTAGCTAAAGAACTCATAGAAAAGTCCAGGGGCACAACTTTCTTATTAATTTTCACAGCTACATCAACCTGAGAGGCTGACATGTCCTGAGTATTTACTAACTTTTGACAAATGTCAGAAC	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2813	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1103:18584:7216	256	chr7	6777323	0	103M2I46M	*	0	0	*	*	NM:i:8	MD:Z:0A10C23A2G7T48A53	AS:i:2813	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1103:8088:8797	0	chr7	6785586	9	151M	*	0	0	GAATTATGTTGTTATTCGTGTTGTTATTTTGACATGAATTCAAAATACAGTATTGTTGTTTTCATTTCATTTCTGCTGTAAAGCTAAATGTTTGACTTCAGGATATGGTTTGAATCATTTTTGTGTTTTTCAGACCTCAGACTCTCAACTT	FFF:FFFFFFFFFFFFFFFFFFF::FFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF,FFFFFFFFFF,::FFFFFFFFF:FFFF:	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1103:8088:8797	272	chr7	6018310	0	151M	*	0	0	*	*	NM:i:4	MD:Z:134A10C0T1C2	AS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1103:15049:13119	0	chr7	6777342	14	151M	*	0	0	GTTAGTAAATACTCAGAACGTGTCAGCTTCTCAGGTTGATGTAGCTGTGAAAATTAATAAGAAAGTTGTGCCCCTGAACTTTTCTGAGTTCTTTAGCTAAACGAATAAAGCAGTTACATCATGAAGCACAGCAAAGTGAAGGGGAACAGAA	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFF:FFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:::,FFFFFFF,FFFF:FFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2894	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1103:15049:13119	272	chr7	6026465	0	66M2D85M	*	0	0	*	*	NM:i:6	MD:Z:66^AT8C48G7T2C16	AS:i:2894	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1103:32551:22795	16	chr7	6785794	5	151M	*	0	0	CTTCGATTTTGTTATCGATGAAAATGGTAAGTTATTAATTAGAACTATAGCGGCTGGGTGTGGTGGCTCACGTCTGTAATCCCAGCACTCTGGGAGGCCAAGGCGGGCAGATCGCCTGAGGTCAGGAGTTTGAGACCAGCCTCGCTAACAT	FFFFFF:F:F,FFFFFFFF:FFFF:FFF:F:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1103:32551:22795	256	chr7	6018102	0	151M	*	0	0	*	*	NM:i:2	MD:Z:8C138A3	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1103:19190:35697	0	chr7	6026928	8	151M	*	0	0	CCTCCGCTCTGTCCGTAGGGTCACTGGGTCCGTGACTGGGACTCACTGCCTCTTTCTGAGATCTCAGGACGCCTTTGTCAGAGATGGCCCCTGAAGTGCTAGAAGACAGCATACCCCTGTTCTGTCCTAGAGGGCTCCTGCGTGGTTCTGG	F:FFFFFFFF:FFFF:FFFFFFFFFF::FFFFFFFF,FFFFF:FFFFFFFFF:FFF,FFFF,FFFFFFFFFFF:FFFFF,FFFF,FFF,FF,F,FFF:F:FFF,FFF,FFFF:FFFFF,FFFFFF:F:FFFFFFFFFF,,F,,FFFFFFFF	NM:i:6	MD:Z:39A20G27A29T20T1T9	AS:i:2894	XS:i:2810	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1103:19190:35697	272	chr7	6776880	0	151M	*	0	0	*	*	NM:i:10	MD:Z:9A1A20A9T0C17A0T27C20T7G31	AS:i:2810	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1104:10628:11193	16	chr7	6026979	7	151M	*	0	0	CTTTCTGAGATCTCAGGACGCCTTTGTCAGAGATGGCACCTGAAGTGCTAGAAGACAGCATACCCCTTTTCTGTCCTAGAGGGCTCCTTCTTGGTTCTGGAGTCTTTGGGCTGTGAGGCTTGTTCTCTGTTGTGTGACGAAGAGAAAAGGC	FFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFF:FFFFF,,:FFFFFFFFFFFFFFFFFFFF,FFFFFFFFFFF::FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:1	MD:Z:9G141	AS:i:2999	XS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1104:10628:11193	256	chr7	6776829	0	151M	*	0	0	*	*	NM:i:4	MD:Z:93T0C17A28C9	AS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1104:10484:17769	16	chr7	6022676	7	151M	*	0	0	TATGTTATAGAACACTGTAATAAAAAAAAAGTCAAACAATACAAAAACAAAATAAAGTCCCTAGCCATCCCGCTTTCTTTTTTTTTGAAACAGAGTCTCGTTCTGTCACCCAGGCTACAGTGCAATGGCACAATCTTGGCTCACTGCAACC	FFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFF,FFF,F:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2957	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1104:10484:17769	256	chr7	6781113	0	121M1I29M	*	0	0	*	*	NM:i:2	MD:Z:53G96	AS:i:2957	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1104:2871:24940	0	chr7	6026457	18	151M	*	0	0	TCCTGTAATTCTGTTCCCCTTCACTTTGCTGTGCTTCATGATGTAACTGCTTTATTCGTTTAGCTAAAGAACTCATAGAAAAGTCCAGGGGCACAACTTTCTTATTAATTTTCACAGCTACATCAACCTGAGAGGCTGACATGTCCTGAGT	FFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2854	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1104:2871:24940	272	chr7	6777352	0	74M2I75M	*	0	0	*	*	NM:i:6	MD:Z:6A2G7T48A82	AS:i:2854	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1104:28754:26271	16	chr7	6777377	9	151M	*	0	0	TTGATGTAGCTGTGAAAATTAATAAGAAAGTTGTGCCCCTGAACTTTTCTGAGTTCTTTAGCTAAACGAATAAAGCAGTTACATCATGAAGCACAGCAAAGTGAAGGGGAACAGAATTACAGGAAGTTTAGGGCAAGGATTTGTCCTGGAG	F:FFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1104:28754:26271	256	chr7	6026430	0	101M2D50M	*	0	0	*	*	NM:i:4	MD:Z:14T86^AT8C41	AS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1104:19633:35023	0	chr7	6776862	3	136M1D15M	*	0	0	CCTCACAGCCCAAAGACTCCAGAACCAAGAAGGAGCCCTCTAGGACAGAAAAGGGGTATGTCGTCTTCTAGCACTTCAGATGCCATCTCTGACAAAGGCGTCCTGAGACCTCAGAAAGAGGCAGTGAGTTCCAGTCCTGTCTCTTATACAC	FFFFFFFFF:FF:F,FFFFFFFFFFFFF:FFF,F,FFF:FFF,FFFFFF:F,F,FFFFF:F:F:FFFFFF::FFFFFFFFF:FFFFFFFFFFFFFFFFFF,FF,FFFFF:FFFFFFF:FFFFFFFFF:FFFFFFFFFFFFFFFFFFFF:FF	NM:i:10	MD:Z:136^A0G0G1A1C1A0G0T0G2C1	AS:i:2809	XS:i:2767	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1104:19633:35023	272	chr7	6026945	0	15M1D136M	*	0	0	*	*	NM:i:12	MD:Z:1G2C0A0C0T1G1T1C1^T56C17A0G60	AS:i:2767	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1104:19633:35023	256	chr13	53045167	0	26M2D9M1D10M1D8M1D2M1D13M5D11M1D6M1D3M1D9M1D3M2D3M1D2M2D11M1D13M2D22M	*	0	0	*	*	NM:i:76	MD:Z:3G0T0A1T4G0C0T4G0G1G0G0G1^TG1G1C5^A0A0T4T1A1^C1C1G0G3^T2^A1G0T2C0A2G0A0G1^CAAGA1C4C0A1T1^C1C0T3^G0C2^G0G5G2^T1A1^AC3^G2^TC1A1A0A0G0A1A2^T1A1A0A0A1A0A2A1^AA0C17T3	AS:i:1417	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1105:27127:15092	16	chr7	6022691	7	151M	*	0	0	TGTAATAAAAAAAAAGTCAAACAATACAAAAACAAAATAAAGTCCCTAGCCATCCCGCTTTCTTTTTTTTTGAAACAGAGTCTCGTTCTGTCACCCAGGCTACAGTGCAATGGCACAATCTTGGCTCACTGCAACCTCCACCTCCCGGGTT	F:FFF:FFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFF:FFF:FF:FF:FFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFF:F	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2957	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1105:27127:15092	256	chr7	6781098	0	136M1I14M	*	0	0	*	*	NM:i:2	MD:Z:68G81	AS:i:2957	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1105:16721:16642	0	chr7	6027090	5	151M	*	0	0	TGTGAGGCTTGTTCTCTGTTGTGTGACGAAGAGAAAAGGCCTCTCGCAGTCTGGAAATGGACACGTCTTTTTTTTCTTCTCCAGTCCTTAATGAAGGGGATTGATCCTGCTTTTCTACCATGGGCTTTTCCAAATCCGCTGCATGCATTTT	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1105:16721:16642	272	chr7	6776718	0	151M	*	0	0	*	*	NM:i:2	MD:Z:82G0G67	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1105:19614:17237	16	chr7	6017335	0	151M	*	0	0	TCCAGTTTTTACTATTTGGCAAGGAAATCAGTTTAGACATTTCAGTGACTGGAGCTAAAAGAATACAATTTTGAGAAAAATCCATGACTTGACAAACACGTTTCACTTGAAAGCTACTTAGGATGAACATCTGAGGCCGGGCGTGGTGGCT	F,:,:FF,FFF,F:,FFFF:,:,:FFFF,FFFFFFF,:FF:FF::FFFFFFF:FFF,,FFFFFF:,:F:F:FFFFFF,:FFFFF::,FFFFF,,FF:,FFF:FFF::,FFFF::F,FF:FF,:FF:FF:F,FF:::F,F,F:FFFFFFFFF	NM:i:3	MD:Z:14G21C1C112	AS:i:2957	XS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1105:19614:17237	256	chr7	6786570	0	151M	*	0	0	*	*	NM:i:4	MD:Z:112G1G21C8G5	AS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1105:23158:25379	0	chr7	6776673	5	151M	*	0	0	TCCCTGACCCTCTTCTCCGTCCACGTTTGCTTAGGTAACTTAATAAAAATGCATGCAGCGGATTTGGAAAAGCCCATGGTAGAAAAGCAGGATCAATCCCCTTCATTAAGGACTGGAGAAGAAAAAAGGGACGTGTCCATTTCCAGACTGC	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFF:FFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1105:23158:25379	272	chr7	6027135	0	151M	*	0	0	*	*	NM:i:2	MD:Z:22T0T127	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1106:16468:4523	0	chr7	6790980	4	151M	*	0	0	CCATGAGACACATCGCCAACCTGGGTGTCATTTCTCAGAACTGACCGTAGTCACTGTATGGAATAATTGGTTTTATCGCAGATTTTTATGTTTTGAGAGACAGAGTCTTCACTAACCTTTTTTGTTTTAAAATGAAACCTGCTACTTAAAA	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFF:F:FFFFFFFFFFFFFFFFF	NM:i:1	MD:Z:96A54	AS:i:2999	XS:i:2957	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1106:16468:4523	272	chr7	6012924	0	14M1I136M	*	0	0	*	*	NM:i:2	MD:Z:53T96	AS:i:2957	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1106:5113:16235	0	chr7	6027100	5	151M	*	0	0	GTTCTCTGTTGTGTGACGAAGAGAAAAGGCCTCTCGCAGTCTGGAAATGGACACGTCTTTTTTTTCTTCTCCAGTCCTTAATGAAGGGGATTGATCCTGCTTTTCTACCATGGGCTTTTCCAAATCCGCTGCATGCATTTTTATTAAGTTA	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1106:5113:16235	272	chr7	6776708	0	151M	*	0	0	*	*	NM:i:2	MD:Z:92G0G57	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1106:14190:25692	0	chr7	6785494	11	151M	*	0	0	CACCTGGCCTGTAGCTATTTTAACTTCTAAAAAGAACTTTAAGAAAGAGAAAATTAAAAGGAACTTCTCAGGAAGTTTTGTGACACTTAGCTGAATTATGTTGTTATTCGTGTTGTTATTTTGACATGAATTCAAAATACAGTATTGTTGT	FFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2915	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1106:14190:25692	272	chr7	6018402	0	151M	*	0	0	*	*	NM:i:5	MD:Z:42A10C0T1C76G17	AS:i:2915	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1106:8070:27430	16	chr7	6785722	0	151M	*	0	0	TCAGACTCTCAACTTAACTGCTGTTAATGAAGCTGTTCTGATAGAAAATCTGGAAATATTTAGAAAGAATGGCTTCGATTTTGTTATCGATGAAAATGGTAAGTTATTAATTAGAACTATAGCGGCTGGGTGTGGTGGCTCACGTCTGTAA	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFF:,FF,F:F:::F:FFF:FFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2999	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1106:8070:27430	256	chr7	6018174	0	151M	*	0	0	*	*	NM:i:1	MD:Z:75A75	AS:i:2999	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1107:8693:6277	0	chr7	6018163	0	151M	*	0	0	GAGTGCTGGGATTACAGACGTGAGCCACCACACCCAGCCGCTATAGTTCTAATTAATAACTTACCATTTTCATCGATAACAAAATCAAAGCCCTTCTTTCTAAATATTTCCAGATTTTCTATCAGAACAGCTTCATTAACAGCAGTTAAGT	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFF,F,F::FF:FF,FFFF:,FFFFFFFFF,FFFFF:FFFFF,F,:FF:,,FFF,F:FF:F,:,:FFFFFF:FFFFFFFFFF,FFFFFFFFFFFFFF,FFFF:FF::F	NM:i:1	MD:Z:92A58	AS:i:2999	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1107:8693:6277	272	chr7	6785733	0	151M	*	0	0	*	*	NM:i:2	MD:Z:58T5C86	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1107:27471:21731	0	chr7	6790922	0	151M	*	0	0	CTGATCACCCACATGGGGGAGATGGACCACCCCTGGAACTGTCCCCATGGAAGGCCAACCATGAGACACATCGCCAACCTGGGTGTCATTTCTCAGAACTGACCGTAGTCACTGTATGGAAGAATTGGTTTTATCGCAGATTTTTATGTTT	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFF,,FFFFFFF:FFFFFFFFFFFFFFFFFFFFF	NM:i:1	MD:Z:121T29	AS:i:2999	XS:i:2999	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1107:27471:21731	272	chr7	6012981	0	151M	*	0	0	*	*	NM:i:1	MD:Z:29A121	AS:i:2999	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1107:29143:25347	0	chr7	6027080	5	151M	*	0	0	GTCTTTGGGCTGTGAGGCTTGTTCTCTGTTGTGTGACGAAGAGAAAAGGCCTCTCGCAGTCTGGAAATGGACACGTCTTTTTTTTCTTCTCCAGTCCTTAATGAAGGGGATTGATCCTGCTTTTCTACCATGGGCTTTTCCAAATCCGCTG	F::FFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:F,FFFFFFFF,FFFFFFFFFF:FFFFFFFFFFFF:FFFFFF:FF:	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1107:29143:25347	272	chr7	6776728	0	151M	*	0	0	*	*	NM:i:2	MD:Z:72G0G77	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1107:9760:26819	16	chr7	6017348	5	151M	*	0	0	AGTTGGCAAGGAAATCAGTTTAGCCCTTTCAGTGACTGGAGCTAAAAGAATACAATTTTGAGAAAAATCCATGACTTGACAAACACGTTTCACTTGAAAGCTACTTAGGATGAACATCTGAGGCCGGGCGTGGTGGCTCACGCCTGTAATC	FFF::FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1107:9760:26819	256	chr7	6786557	0	151M	*	0	0	*	*	NM:i:2	MD:Z:5T4A140	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1108:16731:4069	0	chr7	6776620	0	151M	*	0	0	CTTTTGTGAAGTATCTGTTCACATAAGCACGTCCTCTCACCATTTCAGGATAGTCCCTGACCCTCTTCTCCGTCCACGTTTGCTTAGGTAACTTAATAAAAATGCATGCAGCGGATTTGGAAAAGCCCATGGTAGAAAAGCAGGATCAATC	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFF:FFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:3020	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1108:16731:4069	272	chr7	6027188	0	151M	*	0	0	*	*	NM:i:0	MD:Z:151	AS:i:3020	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1108:9968:10770	0	chr7	6786708	0	151M	*	0	0	AGTAAAAGCTGGACCTTCGGACCCCAGGACGTCGATGAACTGATCTTCATGCTGAGCGACAGCCCTGGGGTCATGTGCCGGCCTTCCCGAGTCAAGCAGATGTTTGCCTCCAGAGCCTGCCGGAAGTCGGTAAGTAAAGAAAGCCTGGCTG	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:F:FFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2999	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1108:9968:10770	272	chr7	6017197	0	151M	*	0	0	*	*	NM:i:1	MD:Z:143T7	AS:i:2999	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1108:16920:33927	0	chr7	6026288	40	151M	*	0	0	ATTCCAGCCTGCGCAACAGAGCAAGACTCTGTCTCAAAAAAATAAAAAATAAAAATAAAAATTTTAGATAAAAAGAGAAAAAGTAAAAAATTAAAACTTTACCTTATCTCTTTTCTTAGTTCATCTTCGGCTGCTTGATTTTCTCCAGGAC	F:FFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:F:FFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2646	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1108:16920:33927	272	chr7	6777519	0	76M1I9M3I46M1I15M	*	0	0	*	*	NM:i:13	MD:Z:74A4A0A2T1G1A32A13A11	AS:i:2646	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1108:13178:34773	0	chr7	6785444	10	151M	*	0	0	CTGCCTGCCTCAGCCTCCTAAAGTGCTGAGATTACAGGCGTGAGCCACCGCACCTGGCCTGTAGCTATTTTAACTTCTAAAAAGAAATTTAAGAAATAGAAAATTAAAAGGAACTTATCAGGAATTTTTGTGACACTAAGCTGATTTATGT	FFFFFFFFFFFF:FFFFFFFFFF:FFFFFFFFFFFFFFF:FF,F:FFFF:,F:,,,::F,FFFFF,F,,FFFF,F,:,FFFFF,:F,,,FFF,FFF,F,,FFF:,FFFF,,FF,,,,,,F,,F:,,,F:::FF:F,F,FFFF:F,,,F:,F	NM:i:6	MD:Z:86C9G19C7G12T6A6	AS:i:2894	XS:i:2789	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1108:13178:34773	272	chr7	6018452	0	151M	*	0	0	*	*	NM:i:11	MD:Z:3C0T1C6A12C7G19C9G18G53C1C11	AS:i:2789	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1108:13178:34773	272	chr9	93540383	0	5M1D5M2D16M2D3M1D9M1D4M2D33M1D6M1D4M1D2M3D5M1I58M	*	0	0	*	*	NM:i:55	MD:Z:3G1^G0G0T1G1^GG16^CT0C2^C2C1T1T2^A1G2^AG0A0C0C0C2G0C0C0C1A0G0G2G1G1C0C1G0C0A0C2C3^C0C5^T4^C2^GAT0T1T5G14T10C9G4A1A5G5	AS:i:1839	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1108:13178:34773	256	chr15	20670400	0	64M2D6M3D1M3D3M1D4M3D6M3D4M1D9M1D9M2D10M2D2M1D5M3D2M3D7M1D19M	*	0	0	*	*	NM:i:67	MD:Z:1C0A2C0A4G0A5C9G19T0A4C1A2C0T0C2^CA6^GTA1^AGC3^A2G1^GGC2T3^CCC2G1^G1C0C1C0C3^A3G1C1C1^CT4A2G0A1^AG2^A0A1A2^CAC2^CCA0C0A0C0A0C2^A1G15A0A0	AS:i:1616	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1108:13178:34773	272	chr15	28875457	0	17M1D4M5D7M1D2M1D4M2D11M2D8M1D7M1D7M3D6M3D4M1D2M5D2M1D5M2D65M	*	0	0	*	*	NM:i:67	MD:Z:0T0T15^C0T3^GTGTG0T0G0G1T0G1^G2^T0T1T1^TC2T0C2T4^AG1G1G1C2^T4G0G1^G0G1C1C2^GGG3A2^GCC1C2^T2^TGCTA2^C5^GT3G0A0G2T1G4T0A19C9G5T0C4T0G2T0G1	AS:i:1616	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1108:13178:34773	256	chr15	23337804	0	64M2D6M3D1M3D3M1D4M3D6M3D4M1D9M1D9M2D10M2D2M1D5M3D2M3D7M1D19M	*	0	0	*	*	NM:i:67	MD:Z:1C0A2C0A4G0A5C9G19T0A4C1A2C0T0C2^CA6^GTA1^AGC3^A2G1^GGC2T3^CCC2G1^G1C0C1C0C3^A3G1C1C1^CT4A2G0A1^AG2^A0A1A2^CAC2^CCA0C0A0C0A0C2^A1G15A0A0	AS:i:1616	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1108:13178:34773	256	chr1	16781093	0	39M1I19M3D9M1D4M7D9M3D8M2D14M2D4M2D5M1D8M1D4M1D3M1D6M4D1M1D17M	*	0	0	*	*	NM:i:67	MD:Z:1C0A5T6A2C9G18T1T0G2C0A3^CAG1T1T1T0G2^C4^GAAAATC6C0C1^TGC0C0T0C1T0T2^TC1C1T0C0T0G3G1T1^GG0G0G2^GT2T2^T5A0A1^T0A0T2^G3^C6^GGAT1^A1A15	AS:i:1595	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1109:21450:8766	16	chr7	6026604	20	151M	*	0	0	GAGTATTTACTAACTTTTGACAAATGTCAGAACTGGAAAGAATTTCTTCTTTTTTAAAACGCTTTGTGTTTGGGGTTGCGAGATTAGTTGGCTGAGGCAAAACTCGAAATTTACATCCGGTATCTTCCTGGTTTGAATGGCAGTCCACATC	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2830	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1109:21450:8766	256	chr7	6777204	0	86M1D65M	*	0	0	*	*	NM:i:9	MD:Z:46A0G24A2T10^A4T7G19A10C21	AS:i:2830	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1109:26539:11318	16	chr7	6776701	5	151M	*	0	0	GCTTAGGTAACTTAATAAAAATGCATGCAGCGGATTTGGAAAAGCCCATGGTAGAAAAGCAGGATCAATCCCCTTCATTAAGGACTGGAGAAGAAAAAAGGGACGTGTCCATTTCCAGACTGCGAGAGGCCTTTTCTCTTCGTCACACAAC	FFFFFFFFFFFF:F:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1109:26539:11318	256	chr7	6027107	0	151M	*	0	0	*	*	NM:i:2	MD:Z:50T0T99	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1109:18376:29403	16	chr7	6777507	32	151M	*	0	0	GGGCAAGGATTTGTCCTGGAGAAAATCAAGCAGCCGAAGATGAACTAAGAAAAGAGATAAGGTAAAGTTTTAATTTTTTACTTTTTATTTTAAATTTGTATTTATTTTTATTTTTTATTTTTTTGAGACAGAATCTTGCTCTGTGCACAGG	FFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2725	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1109:18376:29403	256	chr7	6026295	0	7M1D44M3D12M1D88M	*	0	0	*	*	NM:i:14	MD:Z:4C2^A11C32^AAT1T0T1G2A0A3^G1G79T6	AS:i:2725	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1109:2763:33771	16	chr7	6791075	5	151M	*	0	0	AAAGACAGAGTCTTCACTAACCTTTTTTGTTTTAAAATGAAACCTGCTACTTAAAAAAAATACACATCACACCCATTTAAAAGTGATCTTGAGAACCTTTTCAAACCAGATGGAGCATTGCTTGCAAATTTTTTTTCTCTATGTTTGCATG	FFFF,FFFFFFFFFFFFF:F:FFFFFFF:F:FFFFFFFFF:FF:F:F::FFFFFFFFFFFFFFFF::FFF::,F:FFFFFFFFFFFF,FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF:FF:FFFFFFFFFFFFFF:F,FFF:FFFFF:	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1109:2763:33771	256	chr7	6012829	0	109M1I41M	*	0	0	*	*	NM:i:1	MD:Z:150	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1110:13033:6621	0	chr7	6027120	4	151M	*	0	0	GAGAAAAGGCCTCTCGCAGTCTGGAAATGGACACGTCTTTTTTTTCTTCTCCAGTCCTTAATGAAGGGGATTGATCCTGCTTTTCTACCATGGGCTTTTCCAAATCCGCTGCATGCATTTTTATTAAGTTACCTAAGCAAACTTGGACTGA	FFF:FFF,FFFFFFFFFFF:FFFFF:,FFFFFF:FF:FFFFFFFFF:FFFF:FFFF,FFFFFFFF:,:FF:F:FFFFFFFFFFFFFF,FF:FF,F,F,F::F,FFFF::F,FFF,FFFFFFFFF::::F,F,,FFF,FFF,:,FF,F,,,F	NM:i:2	MD:Z:142G5G2	AS:i:2978	XS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1110:13033:6621	272	chr7	6776688	0	151M	*	0	0	*	*	NM:i:4	MD:Z:2C5C103G0G37	AS:i:2936	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1110:14163:11209	0	chr7	6777212	27	151M	*	0	0	CTGCCATTCAAACCAGGAAGATACCGGATGTAAATTTCAGGTTTTGCCTCAGCCAACTAATCTCACATCCCCAAACACAAAAGTGTTTTAAGAAAGAAGAAATTCTTTCCAATTCTGACATTCGTCAAAAGTTAGTAAATACTCAGAACGT	FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:0	MD:Z:151	AS:i:3020	XS:i:2768	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1110:14163:11209	272	chr7	6026597	0	69M1I81M	*	0	0	*	*	NM:i:11	MD:Z:1T2C23A10C19T7G14T2C24T0C38	AS:i:2768	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1110:18864:11772	16	chr7	6785943	0	151M	*	0	0	ATGGTGAAACCCCATCTCTACTGAAAATACAAACAGTAGCCGGGCCTGGTGGCGGGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGTGGGAGAATCGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCGAGATCACGTCACTGCAC	,,FF,FFFFFF:F,FF:F:FFFFFFFF::FF:F,F:,F:FFFF:FFF:F:FFFFFFFFFFFFFF,,FFF:FFFFFFFFFF::FF:FFFFFFFFFF::FFFFF:F,FFFFFFFFFFFFFFFF,,FFFFFFFFFFFFFFFFFFFFFFFFFFFF	NM:i:1	MD:Z:33A117	AS:i:2999	XS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1110:18864:11772	256	chr7	6017953	0	151M	*	0	0	*	*	NM:i:2	MD:Z:105C11T33	AS:i:2978	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1110:18864:11772	272	chr15	27720092	0	151M	*	0	0	*	*	NM:i:14	MD:Z:35T4T4A7A2C0A31C0A17T2A20T6G2C2G5	AS:i:2726	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1110:18864:11772	272	chr9	6652295	0	151M	*	0	0	*	*	NM:i:15	MD:Z:35T9A7A2C32C0A7T0A9A18C4A4T0G0A1A8	AS:i:2705	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1110:18864:11772	272	chr19	454603	0	34M3D117M	*	0	0	*	*	NM:i:17	MD:Z:1G32^AAA1T4T1A2A10C7G24C0A24C9G13G2C3G4	AS:i:2664	RG:Z:INV_4SMALL_Aug_17_2017_1
A00223:8:H7YG3DMXX:1:1110:18864:11772	272	chr14	74046095	0	151M	*	0	0	*	*	NM:i:18	MD:Z:35T6A2G5C0T3C20G8T2C0A8A6A4A12T0G13G0T1C8	AS:i:2642	RG:Z:INV_4SMALL_Aug_17_2017_1