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October 28, 2021 15:09
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Environment with rasterio, skimage, pytorch, xarray, networkx
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| conda create -n w2w python=3.8 --yes | |
| conda activate w2w | |
| conda install -c conda-forge pytorch xarray=0.16 pytorch torchvision cudatoolkit --yes | |
| conda install dask --yes | |
| conda install -c conda-forge rasterio scikit-image --yes | |
| conda install -c conda-forge seaborn=0.11 --yes | |
| conda install -c anaconda networkx --yes | |
| conda install -c conda-forge zarr gcsfs netcdf4 numba tqdm jupyterlab tensorboard ipython pip ruamel.yaml descartes statsmodels scikit-learn black mypy --yes | |
| conda install -c conda-forge geopandas --yes | |
| conda install -c conda-forge cdsapi --yes | |
| pip install ecmwf-api-client | |
| # Install gsutil: https://cloud.google.com/storage/docs/gsutil_install#linux | |
| cd ~ | |
| curl -O https://dl.google.com/dl/cloudsdk/channels/rapid/downloads/google-cloud-sdk-349.0.0-linux-x86_64.tar.gz | |
| tar -xvzf google-cloud-sdk-349.0.0-linux-x86_64.tar.gz | |
| ./google-cloud-sdk/install.sh | |
| # restart shell | |
| exec $SHELL | |
| # need to initialise cloud login | |
| # gcloud auth login | |
| # gcloud auth application-default login |
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