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/ Pandas resample spline interpolation.ipynb
Last active
May 8, 2019 07:20
Pandas resample spline interpolation.ipynb
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tritemio
/ PSF and particle positions at photon emission times.ipynb
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April 2, 2022 00:50
PSF and particle positions at photon emission times.ipynb
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tritemio
/ Overflow bug in SPC-630 board.ipynb
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December 3, 2018 09:41
Overflow bug in SPC-630 board.ipynb
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tritemio
/ loader_smfret_noalex.py
Created
August 1, 2017 03:52
Load in FRETBursts single-laser smFRET files from SM files
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| def sm_noalex(fname): | |
| print(" - Loading '%s' ... " % fname) | |
| ph_times_t, det_t, labels = loader.load_sm(fname, return_labels=True) | |
| print(" [DONE]\n") | |
| a_em = (det_t == 1) | |
| dx = Data(fname=fname, clk_p=12.5e-9, nch=1, | |
| ALEX=False, lifetime=False, alternated=False, | |
| meas_type='smFRET', | |
| ph_times_m=[ph_times_t], det_donor_accept=(0, 1), A_em=[a_em], |
tritemio
/ FRETBursts - smFRET lifetime example.ipynb
Created
November 9, 2016 20:38
FRETBursts - smFRET lifetime example.ipynb
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tritemio
/ pybroom-example-multi-datasets.ipynb
Last active
July 11, 2016 07:40
Example of using pybroom with multiple datatsets and models
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tritemio
/ Decoding PTU files.ipynb
Last active
November 8, 2016 20:15
Jupyter Notebook for decoding PicoQuant PTU files in python
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tritemio
/ Example - 2CDE Method.ipynb
Last active
March 16, 2016 00:22
A FRETBursts notebooks implementing the 2CDE method.
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tritemio
/ notebook_runner.py
Created
November 10, 2015 18:06
Run notebooks from another notebook, with input parameters
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| def run_notebook(notebook_name): | |
| """Runs the notebook `notebook_name` (file name with no extension). | |
| This function executes notebook with name `notebook_name` (no extension) | |
| and saves the fully executed notebook in a new file appending "-out" | |
| to the original file name. | |
| It also displays links to the original and executed notebooks. | |
| """ | |
| nb_name_full = notebook_name + '.ipynb' |
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