Thomas Sibley tsibley
tsibley
/ git-branch-ttl-stats
Created
October 25, 2022 17:21
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| #!/bin/bash | |
| set -euo pipefail | |
| main() { | |
| merge-commits | branch-ttl | |
| } | |
| merge-commits() { | |
| git log --first-parent --format="%h %at %s" | grep Merge | |
| } |
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| #!/usr/bin/env python3 | |
| import click | |
| from configparser import ConfigParser | |
| @click.command() | |
| @click.argument("file", type = click.File(), metavar = "<file>") | |
| @click.argument("section", metavar = "<section>") | |
| @click.argument("option", metavar = "<option>") | |
| @click.argument("value", metavar = "<value>", required = False) | |
| @click.pass_context |
tsibley
/ 1-augur-api-usage-symbol-freq.json
Last active
October 20, 2022 18:51
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| [ | |
| {"symbol": "augur.__version__.__version__", "count": 2, "percent": 1.4388489208633093, "histogram": "**"}, | |
| {"symbol": "augur.align.read_sequences", "count": 2, "percent": 1.4388489208633093, "histogram": "**"}, | |
| {"symbol": "augur.align.run", "count": 4, "percent": 2.8776978417266186, "histogram": "*****"}, | |
| {"symbol": "augur.ancestral.collect_mutations_and_sequences", "count": 1, "percent": 0.7194244604316546, "histogram": "*"}, | |
| {"symbol": "augur.clades.is_node_in_clade", "count": 4, "percent": 2.8776978417266186, "histogram": "*****"}, | |
| {"symbol": "augur.clades.read_in_clade_definitions", "count": 4, "percent": 2.8776978417266186, "histogram": "*****"}, | |
| {"symbol": "augur.dates.get_numerical_dates", "count": 1, "percent": 0.7194244604316546, "histogram": "*"}, | |
| {"symbol": "augur.distance.read_distance_map", "count": 1, "percent": 0.7194244604316546, "histogram": "*"}, | |
| {"symbol": "augur.export_v2.parse_node_data_and_metadata", "count": 1, "percent": 0.7194244604316546, "histogram": "*"}, |
We can make this file beautiful and searchable if this error is corrected: It looks like row 2 should actually have 3 columns, instead of 2 in line 1.
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| docker_only conda_only both | |
| 2to3 | |
| 2to3-3.10 | |
| acountry | |
| acyclic | |
| adig | |
| aggregate_scores_in_intervals.py | |
| ahost | |
| align_print_template.py | |
| animate |
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| diff --git a/tmp/linux b/tmp/macos | |
| index ef80b0a..b17ee08 100644 | |
| --- a/tmp/linux | |
| +++ b/tmp/macos | |
| @@ -3,7 +3,7 @@ package: | |
| version: "20221018T182447Z" | |
| build: | |
| number: 1 | |
| - string: hb0f4dca_1_locked | |
| + string: h0dc7051_1_locked |
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| <html> | |
| <head> | |
| <style> | |
| pre { line-height: 1em; } | |
| .ansi0 { color: #000; }.ansi1 { color: #f33; }.ansi10 { color: #6d6; }.ansi11 { color: #dd6; }.ansi12 { color: #99f; }.ansi13 { color: #f6f; }.ansi14 { color: #6dd; }.ansi15 { color: #fff; }.ansi2 { color: #2c2; }.ansi3 { color: #bb0; }.ansi4 { color: #55c; }.ansi5 { color: #d3d; }.ansi6 { color: #0cc; }.ansi7 { color: #bbb; }.ansi8 { color: #555; }.ansi9 { color: #f66; }.black { color: #000; }.blue { color: #55c; }.bold { font-weight: bold; }.bright_black { color: #555; }.bright_blue { color: #99f; }.bright_cyan { color: #6dd; }.bright_green { color: #6d6; }.bright_magenta { color: #f6f; }.bright_red { color: #f66; }.bright_white { color: #fff; }.bright_yellow { color: #dd6; }.concealed { visibility: hidden; }.cyan { color: #0cc; }.dark { opacity: 0.7; }.green { color: #2c2; }.grey0 { color: #0a0a0a; }.grey1 { color: #141414; }.grey10 { color: #6e6e6e; }.grey11 { color: #787878; }.grey12 { color: #828282; }.grey13 { color: #8 |
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| # This file may be used to create an environment using: | |
| # $ conda create --name <env> --file <this file> | |
| # platform: linux-64 | |
| @EXPLICIT | |
| https://conda.anaconda.org/bioconda/linux-64/gofasta-1.1.0-h9ee0642_0.tar.bz2#6bfa6853756b739fb5fcd18a37012773 | |
| https://conda.anaconda.org/conda-forge/noarch/font-ttf-ubuntu-0.83-hab24e00_0.tar.bz2#19410c3df09dfb12d1206132a1d357c5 | |
| https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-12.1.0-ha89aaad_16.tar.bz2#6f5ba041a41eb102a1027d9e68731be7 | |
| https://conda.anaconda.org/conda-forge/linux-64/ld_impl_linux-64-2.36.1-hea4e1c9_2.tar.bz2#bd4f2e711b39af170e7ff15163fe87ee | |
| https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-12.1.0-hdcd56e2_16.tar.bz2#b02605b875559ff99f04351fd5040760 | |
| https://conda.anaconda.org/conda-forge/noarch/font-ttf-inconsolata-3.000-h77eed37_0.tar.bz2#34893075a5c9e55cdafac56607368fc6 |
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| name: | |
| channels: | |
| - https://conda.anaconda.org/bioconda | |
| - https://conda.anaconda.org/conda-forge | |
| dependencies: | |
| - frozenlist=1.3.1=py38h0a891b7_0 | |
| - python-fastjsonschema=2.16.2=pyhd8ed1ab_0 | |
| - epiweeks=2.1.4=pyhdfd78af_0 | |
| - grpc-cpp=1.48.1=hbad87ad_1 | |
| - httplib2=0.20.4=pyhd8ed1ab_0 |
tsibley
/ bug.c
Last active
October 7, 2022 22:18
Run locally with `g++ bug.c && ./a.out` or run online at https://coliru.stacked-crooked.com/a/785c49eb44c427fc
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| #include <iostream> | |
| #include <string> | |
| int main() | |
| { | |
| std::string data = "test"; | |
| std::string search = ""; | |
| std::string replace = ""; | |
| std::cout << "data = «" << data << "» (size = " << data.size() << ")\n"; |
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| docker_only | conda_only | both | |
|---|---|---|---|
| 2to3 | |||
| 2to3-3.8 | |||
| acountry | |||
| activate | |||
| acyclic | |||
| adig | |||
| aggregate_profile.pl | |||
| aggregate_scores_in_intervals.py | |||
| ahost |