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Heroku Buildpack R - RPostgreSQL Example
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libcurl4-openssl-dev | |
libpq-dev |
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# httr package included for parse_url function | |
my_packages = c("RPostgreSQL", "httr") | |
install_if_missing = function(p) { | |
if (p %in% rownames(installed.packages()) == FALSE) { | |
install.packages(p) | |
} | |
else { | |
cat(paste("Skipping already installed package:", p, "\n")) | |
} | |
} | |
invisible(sapply(my_packages, install_if_missing)) |
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#!/bin/bash | |
shopt -s extglob | |
set -e | |
heroku create --stack cedar-14 --buildpack https://github.com/virtualstaticvoid/heroku-buildpack-r.git#cedar-14-chroot | |
# add postgresql addon | |
heroku addons:create heroku-postgresql:hobby-dev | |
git push heroku master | |
# run prog.R via console | |
heroku run R --no-save -f /app/prog.R |
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/tmp/tmp.PM1ZGkL6X0 ~/CS/Projects/heroku/heroku-buildpack-r-chroot/src/test/pg | |
Initialized empty Git repository in /tmp/tmp.PM1ZGkL6X0/.git/ | |
[master (root-commit) 6423ebb] initial | |
6 files changed, 108 insertions(+) | |
create mode 100644 .gitignore | |
create mode 100644 Aptfile | |
create mode 100755 init.R | |
create mode 100755 install | |
create mode 100644 output.txt | |
create mode 100644 prog.R | |
Creating app... done, nameless-mountain-46611, stack is cedar-14 | |
Setting buildpack to https://github.com/virtualstaticvoid/heroku-buildpack-r.git#cedar-14-chroot... done | |
https://nameless-mountain-46611.herokuapp.com/ | https://git.heroku.com/nameless-mountain-46611.git | |
Creating heroku-postgresql:hobby-dev on nameless-mountain-46611... free | |
Database has been created and is available | |
! This database is empty. If upgrading, you can transfer | |
! data from another database with pg:copy | |
Created postgresql-clear-40390 as DATABASE_URL | |
Use heroku addons:docs heroku-postgresql to view documentation | |
remote: Compressing source files... done. | |
remote: Building source: | |
remote: | |
remote: -----> R Console app detected | |
remote: -----> Vendoring R 3.3.3 for cedar-14 stack (latest) | |
remote: Downloading and unpacking R binaries (http://heroku-buildpack-r.s3.amazonaws.com/cedar-14/R-3.3.3-binaries-latest.tar.gz) | |
remote: -----> Installing binary dependencies from Aptfile | |
remote: Reading package lists... | |
remote: Building dependency tree... | |
remote: Reading state information... | |
remote: libcurl4-openssl-dev is already the newest version. | |
remote: Suggested packages: | |
remote: postgresql-doc-9.3 | |
remote: The following NEW packages will be installed: | |
remote: libpq-dev libpq5 | |
remote: 0 upgraded, 2 newly installed, 0 to remove and 91 not upgraded. | |
remote: Need to get 219 kB of archives. | |
remote: After this operation, 1,016 kB of additional disk space will be used. | |
remote: Get:1 http://archive.ubuntu.com/ubuntu/ trusty-updates/main libpq5 amd64 9.3.16-0ubuntu0.14.04 [78.9 kB] | |
remote: Get:2 http://archive.ubuntu.com/ubuntu/ trusty-updates/main libpq-dev amd64 9.3.16-0ubuntu0.14.04 [140 kB] | |
remote: debconf: delaying package configuration, since apt-utils is not installed | |
remote: Fetched 219 kB in 0s (488 kB/s) | |
remote: Selecting previously unselected package libpq5. | |
remote: (Reading database ... 27125 files and directories currently installed.) | |
remote: Preparing to unpack .../libpq5_9.3.16-0ubuntu0.14.04_amd64.deb ... | |
remote: Unpacking libpq5 (9.3.16-0ubuntu0.14.04) ... | |
remote: Selecting previously unselected package libpq-dev. | |
remote: Preparing to unpack .../libpq-dev_9.3.16-0ubuntu0.14.04_amd64.deb ... | |
remote: Unpacking libpq-dev (9.3.16-0ubuntu0.14.04) ... | |
remote: Processing triggers for man-db (2.6.7.1-1ubuntu1) ... | |
remote: /usr/bin/mandb: error while loading shared libraries: libmandb-2.6.7.1.so: cannot open shared object file: No such file or directory | |
remote: Setting up libpq5 (9.3.16-0ubuntu0.14.04) ... | |
remote: Setting up libpq-dev (9.3.16-0ubuntu0.14.04) ... | |
remote: -----> Executing init.r script | |
remote: Installing package into ‘/usr/local/lib/R/site-library’ | |
remote: (as ‘lib’ is unspecified) | |
remote: also installing the dependency ‘DBI’ | |
remote: | |
remote: trying URL 'http://cran.revolutionanalytics.com/src/contrib/DBI_0.6-1.tar.gz' | |
remote: Content type 'application/octet-stream' length 611344 bytes (597 KB) | |
remote: ================================================== | |
remote: downloaded 597 KB | |
remote: | |
remote: trying URL 'http://cran.revolutionanalytics.com/src/contrib/RPostgreSQL_0.4-1.tar.gz' | |
remote: Content type 'application/octet-stream' length 476204 bytes (465 KB) | |
remote: ================================================== | |
remote: downloaded 465 KB | |
remote: | |
remote: * installing *source* package ‘DBI’ ... | |
remote: ** package ‘DBI’ successfully unpacked and MD5 sums checked | |
remote: ** R | |
remote: ** inst | |
remote: ** preparing package for lazy loading | |
remote: ** help | |
remote: *** installing help indices | |
remote: ** building package indices | |
remote: ** installing vignettes | |
remote: ** testing if installed package can be loaded | |
remote: * DONE (DBI) | |
remote: * installing *source* package ‘RPostgreSQL’ ... | |
remote: ** package ‘RPostgreSQL’ successfully unpacked and MD5 sums checked | |
remote: checking for gcc... gcc | |
remote: checking for C compiler default output file name... a.out | |
remote: checking whether the C compiler works... yes | |
remote: checking whether we are cross compiling... no | |
remote: checking for suffix of executables... | |
remote: checking for suffix of object files... o | |
remote: checking whether we are using the GNU C compiler... yes | |
remote: checking whether gcc accepts -g... yes | |
remote: checking for gcc option to accept ISO C89... none needed | |
remote: checking build system type... x86_64-unknown-linux-gnu | |
remote: checking host system type... x86_64-unknown-linux-gnu | |
remote: checking target system type... x86_64-unknown-linux-gnu | |
remote: checking for pg_config... /usr/bin/pg_config | |
remote: checking for "/usr/include/postgresql/libpq-fe.h"... yes | |
remote: configure: creating ./config.status | |
remote: config.status: creating src/Makevars | |
remote: ** libs | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I/usr/include/postgresql -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RS-DBI.c -o RS-DBI.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I/usr/include/postgresql -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RS-PQescape.c -o RS-PQescape.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I/usr/include/postgresql -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RS-PostgreSQL.c -o RS-PostgreSQL.o | |
remote: RS-PostgreSQL.c: In function ‘RS_PostgreSQL_createDataMappings’: | |
remote: RS-PostgreSQL.c:446:5: warning: passing argument 1 of ‘Rf_protect’ from incompatible pointer type [enabled by default] | |
remote: PROTECT(flds = RS_DBI_allocFields(num_fields)); | |
remote: ^ | |
remote: In file included from /usr/share/R/include/Rdefines.h:40:0, | |
remote: from S4R.h:64, | |
remote: from RS-DBI.h:29, | |
remote: from RS-PostgreSQL.h:25, | |
remote: from RS-PostgreSQL.c:17: | |
remote: /usr/share/R/include/Rinternals.h:1366:6: note: expected ‘SEXP’ but argument is of type ‘struct RS_DBI_fields *’ | |
remote: SEXP Rf_protect(SEXP); | |
remote: ^ | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I/usr/include/postgresql -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RS-pgsql-copy.c -o RS-pgsql-copy.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I/usr/include/postgresql -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RS-pgsql-getResult.c -o RS-pgsql-getResult.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I/usr/include/postgresql -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RS-pgsql-pqexec.c -o RS-pgsql-pqexec.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -I/usr/include/postgresql -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c RS-pgsql-pqexecparams.c -o RS-pgsql-pqexecparams.o | |
remote: gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o RPostgreSQL.so RS-DBI.o RS-PQescape.o RS-PostgreSQL.o RS-pgsql-copy.o RS-pgsql-getResult.o RS-pgsql-pqexec.o RS-pgsql-pqexecparams.o -L/usr/lib -lpq -L/usr/lib/R/lib -lR | |
remote: installing to /usr/local/lib/R/site-library/RPostgreSQL/libs | |
remote: ** R | |
remote: ** inst | |
remote: ** preparing package for lazy loading | |
remote: ** help | |
remote: *** installing help indices | |
remote: ** building package indices | |
remote: ** testing if installed package can be loaded | |
remote: * DONE (RPostgreSQL) | |
remote: | |
remote: The downloaded source packages are in | |
remote: ‘/tmp/Rtmp16qKWc/downloaded_packages’ | |
remote: Installing package into ‘/usr/local/lib/R/site-library’ | |
remote: (as ‘lib’ is unspecified) | |
remote: also installing the dependencies ‘curl’, ‘openssl’ | |
remote: | |
remote: trying URL 'http://cran.revolutionanalytics.com/src/contrib/curl_2.6.tar.gz' | |
remote: Content type 'application/octet-stream' length 405626 bytes (396 KB) | |
remote: ================================================== | |
remote: downloaded 396 KB | |
remote: | |
remote: trying URL 'http://cran.revolutionanalytics.com/src/contrib/openssl_0.9.6.tar.gz' | |
remote: Content type 'application/octet-stream' length 1239339 bytes (1.2 MB) | |
remote: ================================================== | |
remote: downloaded 1.2 MB | |
remote: | |
remote: trying URL 'http://cran.revolutionanalytics.com/src/contrib/httr_1.2.1.tar.gz' | |
remote: Content type 'application/octet-stream' length 133398 bytes (130 KB) | |
remote: ================================================== | |
remote: downloaded 130 KB | |
remote: | |
remote: * installing *source* package ‘curl’ ... | |
remote: ** package ‘curl’ successfully unpacked and MD5 sums checked | |
remote: Found pkg-config cflags and libs! | |
remote: Using PKG_CFLAGS= | |
remote: Using PKG_LIBS=-lcurl | |
remote: ** libs | |
remote: rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o utils.o version.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c callbacks.c -o callbacks.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c curl.c -o curl.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c download.c -o download.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c escape.c -o escape.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c fetch.c -o fetch.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c form.c -o form.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c getdate.c -o getdate.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c handle.c -o handle.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c ieproxy.c -o ieproxy.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c interrupt.c -o interrupt.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c multi.c -o multi.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c nslookup.c -o nslookup.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c reflist.c -o reflist.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c version.c -o version.o | |
remote: gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o utils.o version.o -lcurl -L/usr/lib/R/lib -lR | |
remote: installing to /usr/local/lib/R/site-library/curl/libs | |
remote: ** R | |
remote: ** data | |
remote: *** moving datasets to lazyload DB | |
remote: ** inst | |
remote: ** preparing package for lazy loading | |
remote: ** help | |
remote: *** installing help indices | |
remote: ** building package indices | |
remote: ** installing vignettes | |
remote: ** testing if installed package can be loaded | |
remote: * DONE (curl) | |
remote: * installing *source* package ‘openssl’ ... | |
remote: ** package ‘openssl’ successfully unpacked and MD5 sums checked | |
remote: Found pkg-config cflags and libs! | |
remote: Using PKG_CFLAGS= | |
remote: Using PKG_LIBS=-lssl -lcrypto | |
remote: ** libs | |
remote: rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o openssl.so | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c aes.c -o aes.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c base64.c -o base64.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c bignum.c -o bignum.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c cert.c -o cert.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c compatibility.c -o compatibility.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c diffie.c -o diffie.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c envelope.c -o envelope.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c error.c -o error.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c hash.c -o hash.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c info.c -o info.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c keygen.c -o keygen.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c keys.c -o keys.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c onload.c -o onload.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c openssh.c -o openssh.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c password.c -o password.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c pem.c -o pem.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c pkcs12.c -o pkcs12.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c pkcs7.c -o pkcs7.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c rand.c -o rand.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c rsa.c -o rsa.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c signing.c -o signing.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c ssl.c -o ssl.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c stream.c -o stream.o | |
remote: gcc -std=gnu99 -I/usr/share/R/include -DNDEBUG -fpic -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2 -g -c write.c -o write.o | |
remote: gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o -lssl -lcrypto -L/usr/lib/R/lib -lR | |
remote: installing to /usr/local/lib/R/site-library/openssl/libs | |
remote: ** R | |
remote: ** inst | |
remote: ** preparing package for lazy loading | |
remote: ** help | |
remote: *** installing help indices | |
remote: ** building package indices | |
remote: ** installing vignettes | |
remote: ** testing if installed package can be loaded | |
remote: * DONE (openssl) | |
remote: * installing *source* package ‘httr’ ... | |
remote: ** package ‘httr’ successfully unpacked and MD5 sums checked | |
remote: ** R | |
remote: ** demo | |
remote: ** inst | |
remote: ** preparing package for lazy loading | |
remote: ** help | |
remote: *** installing help indices | |
remote: ** building package indices | |
remote: ** installing vignettes | |
remote: ** testing if installed package can be loaded | |
remote: * DONE (httr) | |
remote: | |
remote: The downloaded source packages are in | |
remote: ‘/tmp/Rtmp16qKWc/downloaded_packages’ | |
remote: R 3.3.3 successfully installed (with init) | |
remote: -----> Discovering process types | |
remote: Procfile declares types -> (none) | |
remote: Default types for buildpack -> console | |
remote: | |
remote: -----> Compressing... | |
remote: Done: 112.3M | |
remote: -----> Launching... | |
remote: Released v4 | |
remote: https://nameless-mountain-46611.herokuapp.com/ deployed to Heroku | |
remote: | |
remote: Verifying deploy... done. | |
To https://git.heroku.com/nameless-mountain-46611.git | |
* [new branch] master -> master | |
Running R --no-save -f /app/prog.R on nameless-mountain-46611... starting, run.7817 (Free) | |
Running R --no-save -f /app/prog.R on nameless-mountain-46611... connecting, run.7817 (Free) | |
Running R --no-save -f /app/prog.R on nameless-mountain-46611... up, run.7817 (Free) | |
R version 3.3.3 (2017-03-06) -- "Another Canoe" | |
Copyright (C) 2017 The R Foundation for Statistical Computing | |
Platform: x86_64-pc-linux-gnu (64-bit) | |
R is free software and comes with ABSOLUTELY NO WARRANTY. | |
You are welcome to redistribute it under certain conditions. | |
Type 'license()' or 'licence()' for distribution details. | |
R is a collaborative project with many contributors. | |
Type 'contributors()' for more information and | |
'citation()' on how to cite R or R packages in publications. | |
Type 'demo()' for some demos, 'help()' for on-line help, or | |
'help.start()' for an HTML browser interface to help. | |
Type 'q()' to quit R. | |
> # | |
> # Example R program | |
> # | |
> | |
> library("httr") | |
> library("RPostgreSQL") | |
Loading required package: DBI | |
> | |
> db_uri <- Sys.getenv('DATABASE_URL') | |
> parts <- parse_url(db_uri) | |
> | |
> drv <- dbDriver("PostgreSQL") | |
> | |
> con <- dbConnect( | |
+ drv, | |
+ host = parts$hostname, | |
+ port = parts$port, | |
+ user = parts$user, | |
+ password = parts$password, | |
+ dbname = parts$path | |
+ ) | |
> | |
> dbListTables(con) | |
character(0) | |
> | |
> dbDisconnect(con) | |
[1] TRUE | |
> | |
~/CS/Projects/heroku/heroku-buildpack-r-chroot/src/test/pg | |
Destroying nameless-mountain-46611 (including all add-ons)... done |
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# | |
# Example R program, connects to PG and lists tables | |
# | |
library("httr") | |
library("RPostgreSQL") | |
db_uri <- Sys.getenv('DATABASE_URL') | |
parts <- parse_url(db_uri) | |
drv <- dbDriver("PostgreSQL") | |
con <- dbConnect( | |
drv, | |
host = parts$hostname, | |
port = parts$port, | |
user = parts$user, | |
password = parts$password, | |
dbname = parts$path | |
) | |
dbListTables(con) | |
dbDisconnect(con) |
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