Created
June 16, 2024 10:14
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| library(TENxPBMCData) | |
| p68 = TENxPBMCData("pbmc68k") | |
| rownames(p68) = make.names(rowData(p68)$Symbol_TENx, unique=TRUE) | |
| library(scater) | |
| library(scran) | |
| p68 = logNormCounts(p68) | |
| library(celldex) | |
| hpca = HumanPrimaryCellAtlasData() | |
| library(SingleR) | |
| library(BiocParallel) | |
| myb = MulticoreParam(6) | |
| p68s = SingleR(p68, hpca, hpca$label.main, BPPARAM=myb) |
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