Vamsi Kodali vkkodali

Data Wrangler @ncbi; Personal repository

vkkodali / disorder_to_tbl.py

Created January 9, 2019 22:32

Script to parse MobiDB json file to generate a table

	#! /usr/bin/env python3

	import sys
	import gzip
	import json

	input_json = sys.argv[1]

	with gzip.open(input_json, 'rt') as f:
	for line in f:

vkkodali / gff3_to_introns.py

Last active November 2, 2018 00:47

	#!/usr/bin/env python

	import csv
	import os
	import sys
	import gzip
	from collections import defaultdict
	import argparse

	# See http://stackoverflow.com/questions/14207708/ioerror-errno-32-broken-pipe-python