array_designs_look_okay.sh

[fg_atlas@ebi-005 archive]$ mkdir /var/tmp/array-designs
[fg_atlas@ebi-005 archive]$ cp ensembl_87_34/homo_sapiens*A-*.tsv /var/tmp/array-designs
[fg_atlas@ebi-005 archive]$ cd /var/tmp/array-designs
[fg_atlas@ebi-005 array-designs]$ for file in `ls ` ; do cat <(echo -e "ensgene\tdesign_element") <(grep -E "\w+\W\w+" $file) > $file.tmp ; mv $file.tmp $file ; done
[fg_atlas@ebi-005 array-designs]$ wc -l *
    8684 homo_sapiens.A-AFFY-10.tsv
    6938 homo_sapiens.A-AFFY-11.tsv
    5155 homo_sapiens.A-AFFY-12.tsv
    6835 homo_sapiens.A-AFFY-13.tsv
   25196 homo_sapiens.A-AFFY-141.tsv
   10507 homo_sapiens.A-AFFY-1.tsv
    5637 homo_sapiens.A-AFFY-32.tsv
   18376 homo_sapiens.A-AFFY-33.tsv
   14454 homo_sapiens.A-AFFY-34.tsv
   18376 homo_sapiens.A-AFFY-37.tsv
    7821 homo_sapiens.A-AFFY-41.tsv
   39114 homo_sapiens.A-AFFY-44.tsv
   42499 homo_sapiens.A-AFFY-54.tsv
   10507 homo_sapiens.A-AFFY-9.tsv
   26499 homo_sapiens.A-AGIL-28.tsv
   35923 homo_sapiens.A-GEOD-16686.tsv
    1578 homo_sapiens.A-GEOD-74.tsv
   28655 homo_sapiens.A-MEXP-2102.tsv
   26392 homo_sapiens.A-MEXP-2183.tsv
  519707 homo_sapiens.A-MEXP-2246.tsv
   26392 homo_sapiens.A-MEXP-2320.tsv
  885245 total
[fg_atlas@ebi-005 array-designs]$

[fg_atlas@ebi-005 fetch]$ wc -l $ATLAS_PROD/bioentity_properties/archive/ensembl_86*/homo_*A-*tsv
    8684 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-10.tsv
    6938 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-11.tsv
    5155 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-12.tsv
    6835 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-13.tsv
   25196 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-141.tsv
   10507 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-1.tsv
    5637 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-32.tsv
   18376 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-33.tsv
   14454 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-34.tsv
   18376 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-37.tsv
    7821 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-41.tsv
   39114 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-44.tsv
   42499 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-54.tsv
   10507 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AFFY-9.tsv
   26499 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-AGIL-28.tsv
   35923 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-GEOD-16686.tsv
    1578 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-GEOD-74.tsv
   28655 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-MEXP-2102.tsv
   26392 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-MEXP-2183.tsv
  519707 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-MEXP-2246.tsv
   26392 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_86_33/homo_sapiens.A-MEXP-2320.tsv
  885245 total