Skip to content

Instantly share code, notes, and snippets.

@wbazant
Created June 13, 2017 11:30
Show Gist options
  • Save wbazant/b4ccff11c202901ca26a2f879670cde5 to your computer and use it in GitHub Desktop.
Save wbazant/b4ccff11c202901ca26a2f879670cde5 to your computer and use it in GitHub Desktop.
wbazant-ml:open_targets wbazant$ jq -c 'select(.evidence.confidence_level=="high") | select (.target.activity=="http://identifiers.org/cttv.activity/unknown") | .unique_association_fields.study_id ' /var/tmp/cttv010-10-05-2017.json | sort -u | grep -oe 'E-[[:upper:]]*-[[:digit:]]*' | tee /var/tmp/unknown-activity-high-confidence.txt
E-GEOD-1420
E-GEOD-19187
E-GEOD-20189
E-GEOD-21899
E-GEOD-2461
E-GEOD-31138
E-GEOD-32175
E-GEOD-3325
E-GEOD-36076
E-GEOD-49515
E-GEOD-52202
E-GEOD-57803
E-MEXP-804
E-MEXP-980
E-MTAB-3017
E-MTAB-3864
E-MTAB-4785
E-TABM-577
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment