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September 20, 2017 10:42
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| grep GO:0003713 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_89_36/mus_musculus.ensgene.go.tsv | cut -f 1 | sort -u > $ATLAS_PROD/go-unstable/pvalue-by-hand/genes-for-GO_0003713.txt | |
| head -n 1 $ATLAS_EXPS/E-GEOD-59831/E-GEOD-59831-analytics.tsv > $ATLAS_PROD/go-unstable/pvalue-by-hand/E-GEOD-59831-analytics.tsv | |
| join -1 1 -2 1 <(sort -k1 $ATLAS_EXPS/E-GEOD-59831/E-GEOD-59831-analytics.tsv) $ATLAS_PROD/go-unstable/pvalue-by-hand/genes-for-GO_0003713.txt >> $ATLAS_PROD/go-unstable/pvalue-by-hand/E-GEOD-59831-analytics.tsv | |
| # (with headers) | |
| wc -l $ATLAS_EXPS/E-GEOD-59831/E-GEOD-59831-analytics.tsv $ATLAS_PROD/go-unstable/pvalue-by-hand/E-GEOD-59831-analytics.tsv | |
| # 45514 /nfs/public/ro/fg/atlas/experiments/E-GEOD-59831/E-GEOD-59831-analytics.tsv | |
| # 177 /nfs/production3/ma/home/atlas3-production/go-unstable/pvalue-by-hand/E-GEOD-59831-analytics.tsv | |
| tail -n +1 /nfs/public/ro/fg/atlas/experiments/E-GEOD-59831/E-GEOD-59831-analytics.tsv | cut -f 3 | grep -v NA | wc -l | |
| # 20483 | |
| tail -n +1 $ATLAS_PROD/go-unstable/pvalue-by-hand/E-GEOD-59831-analytics.tsv | cut -f 3 | grep -v NA | wc -l | |
| # 158 | |
| cut -f 1 /nfs/production3/ma/home/atlas3-production/bioentity_properties/archive/ensembl_89_36/mus_musculus.ensgene.go.tsv | sort -u | wc -l | |
| # 51826 | |
| # (s,k,M,N) = (20483, 158, 177, 51826) | |
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