Last active
December 12, 2019 17:50
-
-
Save wbhinton/5a9db7f886c86f0ae16c5633ba2f7500 to your computer and use it in GitHub Desktop.
Calculate the percent change of a value within a group
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
#This first method calculates the percent change from previous observation with in a group. | |
#An example: The change in a patient's lab value from obs to obs overtime | |
#The DF should have a field that you want to group, a time range, and value you want | |
# to perform the calculation on. | |
# first step is to order the DF by the Group, then by time | |
df = df.sort(['GroupID','time']) | |
# step two performs the calculation. | |
df['pct_chg']=df.groupby('GroupID)['Value'].pct_change() | |
# Method 2 % change from the inital to final observation | |
init_final = grouped.agg([("pct change", lambda x: (x.iloc[-1] - x.iloc[0]) / x.iloc[0])]) | |
# Method 3 % change from initial to the max value | |
max_init = grouped.agg([("pct change", lambda x: (x.max() - x.iloc[0]) / x.iloc[0])]) | |
# Method 4 % change from min to max within the group. | |
gmm = grouped.agg([("pct change", lambda x: (x.max() - x.min()) / x.min())]) |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment