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January 20, 2016 18:17
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Shiny Gadget example: lmGadget
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library(shiny) | |
# Example usage: | |
# lmGadget(mtcars, "wt", "mpg") | |
# | |
# Returns a list with two items: | |
# $data: Data with excluded rows removed. | |
# $model: lm (model) object. | |
lmGadget <- function(data, xvar, yvar) { | |
library(miniUI) | |
library(ggplot2) | |
ui <- miniPage( | |
gadgetTitleBar("Interactive lm"), | |
miniContentPanel( | |
fillRow(flex = c(NA, 1), | |
fillCol(width = "100px", | |
selectInput("degree", "Polynomial degree", c(1, 2, 3, 4)) | |
), | |
plotOutput("plot1", | |
height = "100%", | |
click = "plot1_click", | |
brush = brushOpts( | |
id = "plot1_brush" | |
) | |
) | |
) | |
), | |
miniButtonBlock( | |
actionButton("exclude_toggle", "Toggle points"), | |
actionButton("exclude_reset", "Reset") | |
) | |
) | |
server <- function(input, output) { | |
# For storing which rows have been excluded | |
vals <- reactiveValues( | |
keeprows = rep(TRUE, nrow(data)) | |
) | |
output$plot1 <- renderPlot({ | |
req(input$degree) | |
formula <- as.formula(paste0("y ~ poly(x, degree = ", input$degree, ")")) | |
# Plot the kept and excluded points as two separate data sets | |
keep <- data[ vals$keeprows, , drop = FALSE] | |
exclude <- data[!vals$keeprows, , drop = FALSE] | |
ggplot(keep, aes_string(xvar, yvar)) + geom_point() + | |
geom_smooth(method = lm, formula = formula, fullrange = TRUE, color = "gray50") + | |
geom_point(data = exclude, fill = NA, color = "black", alpha = 0.25) + | |
coord_cartesian(xlim = range(data[[xvar]]), ylim = range(data[[yvar]])) + | |
theme_bw(base_size = 14) | |
}) | |
# Toggle points that are clicked | |
observeEvent(input$plot1_click, { | |
res <- nearPoints(data, input$plot1_click, allRows = TRUE) | |
vals$keeprows <- xor(vals$keeprows, res$selected_) | |
}) | |
# Toggle points that are brushed, when button is clicked | |
observeEvent(input$exclude_toggle, { | |
res <- brushedPoints(data, input$plot1_brush, allRows = TRUE) | |
vals$keeprows <- xor(vals$keeprows, res$selected_) | |
}) | |
# Reset all points | |
observeEvent(input$exclude_reset, { | |
vals$keeprows <- rep(TRUE, nrow(data)) | |
}) | |
# Handle the Done button being pressed. | |
observeEvent(input$done, { | |
# Replace x and y in the formula with the values in xvar and yvar | |
formula <- as.formula(paste0(yvar, " ~ poly(", xvar, ", degree = ", input$degree, ")")) | |
keep_data <- data[vals$keeprows, , drop = FALSE] | |
# Return the kept points. | |
stopApp( | |
list( | |
data = keep_data, | |
model = lm(formula, keep_data) | |
) | |
) | |
}) | |
} | |
runGadget(ui, server) | |
} |
Try
lmGadget(iris, "Sepal.Length", "Sepal.Width")
I also had to install minUI first
install.packages("miniUI")
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Good. But I need the data because I don't have results.
Thanks