package list for conda

conda-packages.txt

# This file may be used to create an environment using:
# $ conda create --name <env> --file <this file>
# platform: linux-64
backports=1.0=py27_0
backports_abc=0.4=py27_0
bamtools=2.4.0=3
bcftools=1.3=0
bedops=2.4.19=0
bedtools=2.25.0=1
bioconductor-annotationdbi=1.32.3=0
bioconductor-biobase=2.30.0=0
bioconductor-biocgenerics=0.16.1=r3.2.2_0
bioconductor-biomart=2.26.1=r3.2.2_0
bioconductor-iranges=2.4.8=0
bioconductor-s4vectors=0.8.11=0
biopython=1.66=np111py27_0
blist=1.3.6=py27_0
bowtie2=2.2.8=py27_2
bwa=0.7.13=1
ca-certificates=2016.2.28=0
cairo=1.12.18=1
conda=4.0.7=py27_0
conda-env=2.4.5=py27_0
configparser=3.5.0b2=py27_1
curl=7.49.0=0
cycler=0.10.0=py27_0
cython=0.24=py27_0
datamash=1.1.0=0
decorator=4.0.9=py27_0
entrypoints=0.2=py27_1
fastqc=0.11.5=1
flash=1.2.11=0
fontconfig=2.11.1=2
freetype=2.6.3=0
functools32=3.2.3.2=py27_0
get_terminal_size=1.0.0=py27_0
glib=2.43.0=2
gsl=1.16=1
harfbuzz=0.9.39=0
hisat2=2.0.4=py27_0
htslib=1.3=1
icu=56.1=2
ipykernel=4.3.1=py27_0
ipython=4.2.0=py27_0
ipython_genutils=0.1.0=py27_0
ipywidgets=4.1.1=py27_0
java-jdk=8.0.45=0
jbig=2.1=0
jinja2=2.8=py27_1
jpeg=8d=0
jsonschema=2.5.1=py27_0
jupyter=1.0.0=py27_2
jupyter_client=4.2.2=py27_0
jupyter_console=4.1.1=py27_0
jupyter_core=4.1.0=py27_0
libevent=2.0.21=0
libffi=3.2.1=0
libgcc=5.2.0=0
libgfortran=3.0.0=1
libiconv=1.14=1
libpng=1.6.21=1
libsodium=1.0.10=0
libtiff=4.0.6=0
libxml2=2.9.3=0
markupsafe=0.23=py27_2
matplotlib=2.0.0b1=np111py27_1
mistune=0.7.2=py27_0
mkl=11.3.3=0
mysql-python=1.2.5=py27_0
nbconvert=4.2.0=py27_0
nbformat=4.0.1=py27_0
ncurses=5.9=4
nlopt=2.4.2=1
notebook=4.2.0=py27_0
numpy=1.11.0=py27_1
openblas=0.2.14=0
openssl=1.0.2h=0
pandas=0.18.1=np111py27_0
pango=1.39.0=0
parallel=20150922=0
path.py=8.2.1=py27_0
patsy=0.4.1=py27_0
pcre=8.31=0
perl-threaded=5.22.0=10
pexpect=4.0.1=py27_0
picard=2.3.0=0
pickleshare=0.5=py27_0
pip=8.1.1=py27_1
pixman=0.32.6=0
ptyprocess=0.5=py27_0
pybedtools=0.7.7=py27_1
pybigwig=0.2.8=py27_0
pycairo=1.10.0=py27_0
pycosat=0.6.1=py27_0
pycrypto=2.6.1=py27_0
pyfaidx=0.4.7.1=py27_0
pygments=2.1.3=py27_0
pyparsing=2.1.4=py27_0
pyqt=4.11.4=py27_1
pysam=0.9.0=py27_1
python=2.7.11=0
python-dateutil=2.5.3=py27_0
pytz=2016.4=py27_0
pyyaml=3.11=py27_1
pyzmq=15.2.0=py27_1
qt=4.8.7=1
qtconsole=4.2.1=py27_0
r=3.2.2=0
r-assertthat=0.1=r3.2.2_1a
r-base=3.2.2=0
r-bh=1.58.0_1=r3.2.2_0a
r-bitops=1.0_6=r3.2.2_1a
r-boot=1.3_17=r3.2.2_0a
r-brew=1.0_6=r3.2.2_1a
r-car=2.1_0=r3.2.2_0a
r-caret=6.0_62=r3.2.2_0a
r-class=7.3_14=r3.2.2_0a
r-cluster=2.0.3=r3.2.2_0a
r-codetools=0.2_14=r3.2.2_0a
r-colorspace=1.2_6=r3.2.2_0a
r-curl=0.9.4=r3.2.2_0a
r-dbi=0.3.1=r3.2.2_2a
r-devtools=1.9.1=r3.2.2_0a
r-dichromat=2.0_0=r3.2.2_2a
r-digest=0.6.9=r3.2.2_0
r-dplyr=0.4.3=r3.2.2_0a
r-evaluate=0.8=r3.2.2_0a
r-foreach=1.4.3=r3.2.2_0a
r-foreign=0.8_66=r3.2.2_0a
r-ggplot2=2.1.0=r3.2.2_0
r-git2r=0.11.0=r3.2.2_0a
r-gtable=0.1.2=r3.2.2_2a
r-httr=1.0.0=r3.2.2_0a
r-iterators=1.0.8=r3.2.2_0a
r-jsonlite=0.9.19=r3.2.2_0
r-kernsmooth=2.23_15=r3.2.2_0a
r-labeling=0.3=r3.2.2_1a
r-lattice=0.20_33=r3.2.2_0a
r-lazyeval=0.1.10=r3.2.2_2a
r-lme4=1.1_10=r3.2.2_0a
r-magrittr=1.5=r3.2.2_1a
r-mass=7.3_45=r3.2.2_0a
r-matrix=1.2_2=r3.2.2_0a
r-matrixmodels=0.4_1=r3.2.2_0a
r-memoise=0.2.1=r3.2.2_1a
r-mgcv=1.8_9=r3.2.2_0a
r-mime=0.4=r3.2.2_0a
r-minqa=1.2.4=r3.2.2_1a
r-munsell=0.4.2=r3.2.2_1a
r-nlme=3.1_122=r3.2.2_0a
r-nloptr=1.0.4=r3.2.2_1a
r-nnet=7.3_11=r3.2.2_0a
r-pbkrtest=0.4_2=r3.2.2_2a
r-plyr=1.8.3=r3.2.2_0a
r-quantreg=5.19=r3.2.2_0a
r-r6=2.1.1=r3.2.2_0a
r-rcolorbrewer=1.1_2=r3.2.2_2a
r-rcpp=0.12.2=r3.2.2_0a
r-rcppeigen=0.3.2.5.1=r3.2.2_0a
r-rcurl=1.95_4.7=r3.2.2_0a
r-recommended=3.2.2=r3.2.2_0
r-reshape2=1.4.1=r3.2.2_1a
r-roxygen2=5.0.1=r3.2.2_0a
r-rpart=4.1_10=r3.2.2_0a
r-rsqlite=1.0.0=r3.2.2_1a
r-rstudioapi=0.3.1=r3.2.2_0a
r-rversions=1.0.2=r3.2.2_0a
r-scales=0.3.0=r3.2.2_0a
r-sparsem=1.7=r3.2.2_0a
r-spatial=7.3_11=r3.2.2_0a
r-stringi=1.0_1=r3.2.2_0a
r-stringr=1.0.0=r3.2.2_0a
r-survival=2.38_3=r3.2.2_0a
r-tidyr=0.3.1=r3.2.2_0a
r-whisker=0.3_2=r3.2.2_1a
r-xml=3.98_1.3=r3.2.2_0a
r-xml2=0.1.2=r3.2.2_0a
readline=6.2=2
requests=2.10.0=py27_0
rseqc=2.6.2=0
samtools=1.3.1=1
scikit-learn=0.17.1=np111py27_1
scipy=0.17.1=np111py27_0
seaborn=0.7.0=py27_0
seqtk=r93=0
setuptools=21.2.1=py27_0
simplegeneric=0.8.1=py27_0
singledispatch=3.4.0.3=py27_1
sip=4.16.9=py27_0
six=1.10.0=py27_0
sqlite=3.13.0=0
ssl_match_hostname=3.4.0.2=py27_1
statsmodels=0.6.1=np111py27_1
system=5.8=2
terminado=0.5=py27_1
tk=8.5.18=0
tmux=2.1=1
tornado=4.3=py27_1
traitlets=4.2.1=py27_0
trimmomatic=0.36=3
wheel=0.29.0=py27_0
xz=5.2.2=0
yaml=0.1.6=0
zeromq=4.1.4=0
zlib=1.2.8=3