Created
August 11, 2015 16:36
-
-
Save wckdouglas/c1d067ce64c4c09af20b to your computer and use it in GitHub Desktop.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| #!/usr/bin/env Rscript | |
| source("http://bioconductor.org/biocLite.R") | |
| packages <- c('data.table','readr', | |
| 'dplyr','plyr', | |
| 'ggplot2','cowplot', | |
| 'caret','RMySQL', | |
| 'tidyr','stringr', | |
| 'pheatmap','Rcpp') | |
| biocPackages <- c('DESeq','DESeq2', | |
| 'Rsamtools','biomaRt') | |
| installation <- function(x){ | |
| install.packages(x,dependencies = TRUE) | |
| } | |
| biocInstallation <- function(x){ | |
| biocLite(x) | |
| } | |
| a <- lapply(packages,installation) | |
| b <- lapply(biocPackages,biocInstallation) |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment