wdecoster · October 21, 2017 12:05
diff --git a/ThreadPool-fastq-metrics.py b/ThreadPool-fastq-metrics.py
 def stream_fastq_full(fastq, threads):
    '''
    Extract from a fastq file:
    -readname
    -average and median quality
    -read_lenght
    '''
    with cfutures.ThreadPoolExecutor(max_workers=threads) as executor:
        for results in executor.map(extract_all_from_fastq, SeqIO.parse(fastq, "fastq")):
            yield results
	def stream_fastq_full(fastq, threads):
	'''
	Extract from a fastq file:
	-readname
	-average and median quality
	-read_lenght
	'''
	with cfutures.ThreadPoolExecutor(max_workers=threads) as executor:
	for results in executor.map(extract_all_from_fastq, SeqIO.parse(fastq, "fastq")):
	yield results
No results found