Created
August 15, 2019 16:10
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ARROW-3246 Benchmarks
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{ | |
"cells": [ | |
{ | |
"cell_type": "code", | |
"execution_count": 1, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"import numpy as np\n", | |
"import pyarrow as pa\n", | |
"import pyarrow.parquet as pq\n", | |
"import pandas as pd\n", | |
"from pandas.util.testing import rands\n", | |
" \n", | |
"NUNIQUE = 1000\n", | |
"STRING_SIZE = 50\n", | |
"LENGTH = 10_000_000\n", | |
"REPEATS = LENGTH // NUNIQUE\n", | |
"\n", | |
"uniques = np.array([rands(STRING_SIZE) for i in range(NUNIQUE)], dtype='O')\n", | |
"indices = np.random.randint(0, NUNIQUE, size=LENGTH).astype('i4') \n", | |
"data = uniques.take(indices)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 2, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"import gc\n", | |
"class memory_use:\n", | |
" \n", | |
" def __init__(self):\n", | |
" self.start_use = pa.total_allocated_bytes() \n", | |
" self.pool = pa.default_memory_pool()\n", | |
" self.start_peak_use = self.pool.max_memory()\n", | |
" \n", | |
" def __enter__(self):\n", | |
" return\n", | |
" \n", | |
" def __exit__(self, type, value, traceback):\n", | |
" gc.collect()\n", | |
" print(\"Change in memory use: {}\"\n", | |
" .format(pa.total_allocated_bytes() - self.start_use))\n", | |
" print(\"Change in peak use: {}\"\n", | |
" .format(self.pool.max_memory() - self.start_peak_use))" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 3, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"dict_data = pa.DictionaryArray.from_arrays(indices, uniques)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 4, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"data": { | |
"text/plain": [ | |
"72320" | |
] | |
}, | |
"execution_count": 4, | |
"metadata": {}, | |
"output_type": "execute_result" | |
} | |
], | |
"source": [ | |
"pa.default_memory_pool().max_memory()" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 5, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"Change in memory use: 16777216\n", | |
"Change in peak use: 53475584\n" | |
] | |
} | |
], | |
"source": [ | |
"table = pa.table([dict_data], names=['f0'])\n", | |
"with memory_use():\n", | |
" out_stream = pa.BufferOutputStream()\n", | |
" pq.write_table(table, out_stream)\n", | |
" contents = out_stream.getvalue()" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 6, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"204 ms ± 3.62 ms per loop (mean ± std. dev. of 7 runs, 1 loop each)\n" | |
] | |
} | |
], | |
"source": [ | |
"%%timeit\n", | |
"out_stream = pa.BufferOutputStream()\n", | |
"pq.write_table(table, out_stream)\n", | |
"contents = out_stream.getvalue()" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 7, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"data": { | |
"text/plain": [ | |
"12574992" | |
] | |
}, | |
"execution_count": 7, | |
"metadata": {}, | |
"output_type": "execute_result" | |
} | |
], | |
"source": [ | |
"len(contents)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 8, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"97.2 ms ± 2.56 ms per loop (mean ± std. dev. of 7 runs, 10 loops each)\n" | |
] | |
} | |
], | |
"source": [ | |
"%timeit returned_table = pq.read_table(contents)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 9, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"93.9 ms ± 2.34 ms per loop (mean ± std. dev. of 7 runs, 10 loops each)\n" | |
] | |
} | |
], | |
"source": [ | |
"%timeit returned_table = pq.read_table(contents, read_dictionary=['f0'])" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 17, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"dense_data = dict_data.cast(pa.utf8())\n", | |
"table = pa.table([dense_data], names=['f0'])" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 13, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"329 ms ± 3.84 ms per loop (mean ± std. dev. of 7 runs, 1 loop each)\n" | |
] | |
} | |
], | |
"source": [ | |
"%%timeit\n", | |
"out_stream = pa.BufferOutputStream()\n", | |
"pq.write_table(table, out_stream)\n", | |
"contents = out_stream.getvalue()" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 18, | |
"metadata": {}, | |
"outputs": [], | |
"source": [ | |
"out_stream = pa.BufferOutputStream()\n", | |
"pq.write_table(table, out_stream)\n", | |
"contents = out_stream.getvalue()" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 19, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"name": "stdout", | |
"output_type": "stream", | |
"text": [ | |
"373 ms ± 11.2 ms per loop (mean ± std. dev. of 7 runs, 1 loop each)\n" | |
] | |
} | |
], | |
"source": [ | |
"%%timeit\n", | |
"returned_table = pq.read_table(contents)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": 20, | |
"metadata": {}, | |
"outputs": [ | |
{ | |
"data": { | |
"text/plain": [ | |
"pyarrow.Table\n", | |
"f0: string" | |
] | |
}, | |
"execution_count": 20, | |
"metadata": {}, | |
"output_type": "execute_result" | |
} | |
], | |
"source": [ | |
"pq.read_table(contents)" | |
] | |
}, | |
{ | |
"cell_type": "code", | |
"execution_count": null, | |
"metadata": {}, | |
"outputs": [], | |
"source": [] | |
} | |
], | |
"metadata": { | |
"kernelspec": { | |
"display_name": "Python 3", | |
"language": "python", | |
"name": "python3" | |
}, | |
"language_info": { | |
"codemirror_mode": { | |
"name": "ipython", | |
"version": 3 | |
}, | |
"file_extension": ".py", | |
"mimetype": "text/x-python", | |
"name": "python", | |
"nbconvert_exporter": "python", | |
"pygments_lexer": "ipython3", | |
"version": "3.7.3" | |
} | |
}, | |
"nbformat": 4, | |
"nbformat_minor": 2 | |
} |
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