poetry issue

pyproject.toml

[build-system]
requires = ["poetry-core"]
build-backend = "poetry.core.masonry.api"

[tool.poetry]
name = "Dragon"
version = "0.1.0"
description = "A graph deep learning based tool to integrate multi single cell spatial omics datasets"
readme = "README.md"
license = "MIT"
authors = [ "Chen-Rui Xia<[email protected]>",]
keywords = ["bioinformatics", "deep-learning", "graph-deep-learning", "single-cell", "spatial-omics"]
repository = "https://github.com/gao-lab/spatialGLUE-dev"
documentation = ""
classifiers = [
    "Intended Audience :: Science/Research",
    "License :: OSI Approved :: MIT License",
    "Natural Language :: English",
    "Operating System :: MacOS :: MacOS X",
    "Operating System :: POSIX :: Linux",
    "Programming Language :: Python :: 3",
    "Programming Language :: Python :: 3.7",
    "Programming Language :: Python :: 3.8",
    "Programming Language :: Python :: 3.9",
    "Topic :: Scientific/Engineering :: Bio-Informatics"
]

[tool.poetry.dependencies]
python = "^3.8"
numpy = ">1.19"
scipy = ">1.3"
pandas = ">1.1"
matplotlib = ">3.1.2"
seaborn = ">0.9"
dill = ">0.2.3"
tqdm = ">4.27"
scikit-learn = ">0.21.2"
statsmodels = ">0.10"
parse = ">1.3.2"
torch = {url="https://download.pytorch.org/whl/cpu/torch-1.11.0%2Bcpu-cp38-cp38-linux_x86_64.whl"}
torch-scatter = {url="https://data.pyg.org/whl/torch-1.11.0%2Bcpu/torch_scatter-2.0.9-cp38-cp38-linux_x86_64.whl"}
torch-sparse = {url="https://data.pyg.org/whl/torch-1.11.0%2Bcpu/torch_sparse-0.6.13-cp38-cp38-linux_x86_64.whl"}
torch-cluster = {url="https://data.pyg.org/whl/torch-1.11.0%2Bcpu/torch_cluster-1.6.0-cp38-cp38-linux_x86_64.whl"}
torch-geometric = "*"
pytorch_lightning = "*"
anndata = ">0.7"
scanpy = ">1.5"
h5py = "*"
packaging = "*"
joblib = "*"
pyyaml = "*"
harmony-pytorch = "*"

[tool.poetry.group.gpu]
optional = true
[tool.poetry.group.gpu.dependencies]
pynvml = "*"

[tool.poetry.group.docs.dependencies]
sphinx = "*"
sphinx-autodoc-typehints = "*"
sphinx-copybutton = "*"
sphinx-intl = "*"
nbsphinx = "*"
sphinx-rtd-theme = "*"
ipython = "*"
jinja2 = "*"
myst-parser = "*"

[tool.poetry.group.test.dependencies]
pytest = "*"
pytest-cov = "*"