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@yudhastyawan
Last active August 12, 2021 05:24
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convert xml data to polezeros using obspy
import os
import glob
import shutil
from obspy import read_inventory
xmlFiles = glob.glob("./*.xml")
for xmlFile in xmlFiles:
print(xmlFile)
inventory = read_inventory(xmlFile)
inventory.write("temp.txt",
format="SACPZ")
file = open("temp.txt", "r")
data = file.readlines()
file.close()
total = [i for i in range(len(data)) if (data[i] == '* **************************************************\n' and data[i - 1] == '\n')]
if (os.path.isdir("./pazdir") == False):
os.mkdir("./pazdir")
name = []
for idx in total:
net = data[idx + 1].split()[-1]
stat = data[idx + 2].split()[-1]
loc = data[idx + 3].split()[-1] if data[idx + 3].split()[-1] != ":" else ""
chan = data[idx + 4].split()[-1]
name.append(f"PZ_{net}_{stat}_{loc}_{chan}")
for i in range(len(total)):
file = open(f"./pazdir/{name[i]}", "w")
new = "".join(data[total[i]:total[i+1]]) if i != (len(total) - 1) else "".join(data[total[i]::])
file.write(new)
file.close()
os.remove("temp.txt")
import os
file = open("test1.txt", "r")
data = file.readlines()
file.close()
total = [i for i in range(len(data)) if (data[i] == '* **************************************************\n' and data[i - 1] == '\n')]
if (os.path.isdir("./pazdir") == False):
os.mkdir("./pazdir")
name = []
for idx in total:
net = data[idx + 1].split()[-1]
stat = data[idx + 2].split()[-1]
loc = data[idx + 3].split()[-1] if data[idx + 3].split()[-1] != ":" else ""
chan = data[idx + 4].split()[-1]
name.append(f"PZ_{net}_{stat}_{loc}_{chan}")
for i in range(len(total)):
file = open(f"./pazdir/{name[i]}", "w")
new = "".join(data[total[i]:total[i+1]]) if i != (len(total) - 1) else "".join(data[total[i]::])
file.write(new)
file.close()
import sys
import os
import getopt
from cmd import Cmd
from obspy import read_inventory
helpstring = """XML to Poles-Zeros Program
---------------------------
USAGE:
python xml2pz.py -i <input_file>
OR
python xml2pz.py --ifile <input_file>
THE ALLOWED FILE EXTENSIONS:
*.XML OR *.xml
"""
def polezero_f(NETWORK, STATION, CHANNEL, CREATED, START, END, DESCRIPTION, LATITUDE, LONGITUDE, ELEVATION, DEPTH,
DIP, AZIMUTH, SAMPLE_RATE, INPUT_UNIT, INSTTYPE, INSTGAIN, COMMENT, SENSITIVITY, A0, SACPZ):
polezero=f"""* **********************************
* NETWORK (KNETWK): {NETWORK}
* STATION (KSTNM): {STATION}
* LOCATION (KHOLE):
* CHANNEL (KCMPNM): {CHANNEL}
* CREATED : {CREATED}
* START : {START}
* END : {END}
* DESCRIPTION : {DESCRIPTION}
* LATITUDE : {LATITUDE:.6f}
* LONGITUDE : {LONGITUDE:.6f}
* ELEVATION : {ELEVATION:.1f}
* DEPTH : {DEPTH:.1f}
* DIP : {DIP:.1f}
* AZIMUTH : {AZIMUTH:.1f}
* SAMPLE RATE : {SAMPLE_RATE:.1f}
* INPUT UNIT : {INPUT_UNIT}
* OUTPUT UNIT : COUNTS
* INSTTYPE : {INSTTYPE}
* INSTGAIN : {INSTGAIN:.6e} (M/S)
* COMMENT : {COMMENT}
* SENSITIVITY : {SENSITIVITY:.6e} (M/S)
* A0 : {A0:.6e}
* **********************************
{SACPZ}"""
return polezero
def polezero_f_mod(NETWORK, STATION, CHANNEL, SACPZ):
polezero=f"""* **********************************
* NETWORK (KNETWK): {NETWORK}
* STATION (KSTNM): {STATION}
* LOCATION (KHOLE):
* CHANNEL (KCMPNM): {CHANNEL}
* **********************************
{SACPZ}"""
return polezero
def convert2pz(inv):
currdir = os.getcwd()
destdir = os.path.join(currdir,'output')
if not os.path.isdir(destdir):
os.mkdir(destdir)
for i in range(len(inv)):
NETWORK = inv[i].code
for j in range(len(inv[i])):
STATION = inv[i][j].code
for k in range(len(inv[i][j])):
CHANNEL = inv[i][j][k].code
LOCATION_CODE = inv[i][j][k].location_code
SACPZ = inv[i][j][k].response.get_sacpz()
FILENAME = f'SAC_PZs_{NETWORK}_{STATION}_{LOCATION_CODE}_{CHANNEL}'
CONTENT = polezero_f_mod(NETWORK,STATION,CHANNEL,SACPZ)
file = open(os.path.join(destdir,FILENAME),'w')
file.write(CONTENT)
file.close()
print(f'{FILENAME} has been created!')
class xml2pz(Cmd):
prompt = 'xml2pz> '
intro = """XML to Poles-Zeros Program\n---------------------------\n"""
inputfile = None
inv = None
def __init__(self, arg=None):
super(xml2pz, self).__init__()
if arg != None:
if arg.split('.')[-1] in ('xml', 'XML'):
self.inputfile = arg
self.intro += f"file = {self.inputfile}"
self.inv = read_inventory(self.inputfile)
else:
print("""THE ALLOWED FILE EXTENSIONS:\n\t*.XML OR *.xml""")
sys.exit(2)
def do_exit(self, arg):
return True
def do_quit(self, arg):
return True
def do_read(self, arg):
arg = arg.split()[0]
if arg.split('.')[-1] in ('xml', 'XML'):
if os.path.isfile(arg):
self.inputfile = arg
self.intro += f"file = {self.inputfile}"
self.inv = read_inventory(self.inputfile)
else:
print("""File Is Not Found.""")
else:
print("""THE ALLOWED FILE EXTENSIONS:\n\t*.XML OR *.xml""")
def do_print(self, arg):
if self.inputfile != None:
print(self.inv)
else:
print("You Do Not Input The File!\nUse 'read <input_file>' First To Do This")
def do_convert(self, arg):
if self.inputfile != None:
convert2pz(self.inv)
else:
print("You Do Not Input The File!\nUse 'read <input_file>' First To Do This")
def main(argv):
inputfile = None
try:
opts, args = getopt.getopt(argv, "hi:co",["ifile="])
except getopt.GetoptError:
print("""python xml2pz.py -i <input_file>""")
sys.exit(2)
if not opts:
xml2pz().cmdloop()
else:
for opt, arg in opts:
if opt == '-h':
print(helpstring)
sys.exit()
elif opt in ("-i", "--ifile"):
if arg.split('.')[-1] in ('xml', 'XML'):
inputfile = arg
else:
print("""THE ALLOWED FILE EXTENSIONS:\n\t*.XML OR *.xml""")
sys.exit(2)
elif opt == "-c":
if inputfile != None:
xml2pz(inputfile).cmdloop()
sys.exit()
elif opt == "-o":
# THE MAIN SCRIPT
inv = read_inventory(inputfile)
convert2pz(inv)
sys.exit()
if inputfile != None:
# THE MAIN SCRIPT
inv = read_inventory(inputfile)
print(inv)
if __name__ == '__main__':
main(sys.argv[1:])
@yudhastyawan
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yudhastyawan commented Aug 12, 2021

An alternative way to create SACPZ files

how to create a file for the whole data in Station XML and convert to SACPZ files:

change filename.xml into your filename, change filename.txt into your output filename and then run this program:

from obspy import read_inventory
inventory = read_inventory("filename.xml")
inventory.write("filename.txt",
                format="SACPZ")

after this, use splitxml.py (after changing test1.txt into your output filename previously) to split a file into separate files.


If having multiple XML files, we can use multiplexml2sacpz.py

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