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Spark GraphX demo
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import org.apache.spark.graphx._ | |
import org.apache.spark.rdd.RDD | |
case class Peep(name: String, age: Int) | |
val vertexArray = Array( | |
(1L, Peep("Kim", 23)), | |
(2L, Peep("Pat", 31)), | |
(3L, Peep("Chris", 52)), | |
(4L, Peep("Kelly", 39)), | |
(5L, Peep("Leslie", 45)) | |
) | |
val edgeArray = Array( | |
Edge(2L, 1L, 7), | |
Edge(2L, 4L, 2), | |
Edge(3L, 2L, 4), | |
Edge(3L, 5L, 3), | |
Edge(4L, 1L, 1), | |
Edge(5L, 3L, 9) | |
) | |
val vertexRDD: RDD[(Long, Peep)] = sc.parallelize(vertexArray) | |
val edgeRDD: RDD[Edge[Int]] = sc.parallelize(edgeArray) | |
val g: Graph[Peep, Int] = Graph(vertexRDD, edgeRDD) | |
val results = g.triplets.filter(t => t.attr > 7) | |
for (triplet <- results.collect) { | |
println(s"${triplet.srcAttr.name} loves ${triplet.dstAttr.name}") | |
} |
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import org.apache.spark.graphx._ | |
import org.apache.spark.rdd.RDD | |
val sqlContext = new org.apache.spark.sql.SQLContext(sc) | |
import sqlContext._ | |
val word = sqlContext.parquetFile("word.parquet") | |
word.registerTempTable("word") | |
val edge = sqlContext.parquetFile("edge.parquet") | |
edge.registerTempTable("edge") | |
sql("SELECT * FROM word").take(5) | |
sql("SELECT * FROM edge").take(5) | |
val n = sql("SELECT id, stem FROM word").distinct() | |
val nodes: RDD[(Long, String)] = n.map(p => (p(0).asInstanceOf[Long], p(1).asInstanceOf[String])) | |
val e = sql("SELECT * FROM edge") | |
val edges: RDD[Edge[Int]] = e.map(p => Edge(p(0).asInstanceOf[Long], p(1).asInstanceOf[Long], 0)) | |
val g: Graph[String, Int] = Graph(nodes, edges) | |
val ranks = g.pageRank(0.0001).vertices | |
ranks.join(nodes).sortBy(_._2._1, ascending=false).foreach(println) |
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// SSSP impl in Graphx using Pregel | |
// https://en.wikipedia.org/wiki/Dijkstra%27s_algorithm | |
// http://spark.apache.org/docs/latest/graphx-programming-guide.html#pregel-api | |
// http://stackoverflow.com/questions/23700124/how-to-get-sssp-actual-path-by-apache-spark-graphx | |
import org.apache.spark.graphx._ | |
import org.apache.spark.graphx.util.GraphGenerators | |
val graph = GraphGenerators.logNormalGraph(sc, numVertices = 5, numEParts = sc.defaultParallelism, mu = 4.0, sigma = 1.3).mapEdges(e => e.attr.toDouble) | |
graph.edges.foreach(println) | |
// initialize all vertices except the root to have distance infinity | |
val sourceId: VertexId = 0 | |
val initialGraph : Graph[(Double, List[VertexId]), Double] = graph.mapVertices((id, _) => if (id == sourceId) (0.0, List[VertexId](sourceId)) else (Double.PositiveInfinity, List[VertexId]())) | |
val sssp = initialGraph.pregel((Double.PositiveInfinity, List[VertexId]()), Int.MaxValue, EdgeDirection.Out)( | |
// vertex program | |
(id, dist, newDist) => if (dist._1 < newDist._1) dist else newDist, | |
// send message | |
triplet => { | |
if (triplet.srcAttr._1 < triplet.dstAttr._1 - triplet.attr ) { | |
Iterator((triplet.dstId, (triplet.srcAttr._1 + triplet.attr , triplet.srcAttr._2 :+ triplet.dstId))) | |
} else { | |
Iterator.empty | |
} | |
}, | |
// merge message | |
(a, b) => if (a._1 < b._1) a else b) | |
println(sssp.vertices.collect.mkString("\n") | |
) |
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