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#!/usr/bin/env python
# -*- coding: utf-8 -*-

# Written by Titus von der Malsburg <[email protected]>, March 2014.

# This is a simple script for converting vCard files to
# org-contacts.  There is one mandatory argument: the name of the
# vCard file.  The result is printed to standard out.

# Usage:

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def get_inat_access_token(username = None, password = None, app_id = None, app_secret = None, jwt=True):
	""" Get iNaturalist access token to make authenticated api requests and access your private data.  
		Example posted in <https://groups.google.com/g/inaturalist/c/PNfHggqoIYs/m/Lk30rlzKBAAJ>  
		and forked from <https://gist.github.com/kueda/53ef93159c64de96ddc2>  
		Other Python-iNaturalist stuff:
		- <https://github.com/pyinat/pyinaturalist/>
		- <https://inaturalist.nz/posts/20991-20-oauth2-package-for-python-body-str-paramsxml>
		- <https://www.inaturalist.org/journal/glmory/21331-python-upload-script>
		- <https://www.inaturalist.org/journal/glmory/21539-updated-python-upload-script>
		- <https://github.com/glmory/iNaturalist-Uploads>

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#encoding: utf-8
#
# Script to parse Esslinger's A Cumulative Checklist for the Lichen-forming,
# Lichenicolous and Allied Fungi of the Continental United States and Canada
# into machine-readable CSV.
#
# Esslinger's checklist (e.g.
# http://www.ndsu.edu/pubweb/~esslinge/chcklst/chcklst7.htm) is considered
# authoritative for North American lichens, but it's authored with MS Word and
# has incosistent formatting. This script attempts to smooth that out and

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def pma_import_resubmit(br, sqlfile, target_dbname): 
	""" To be used in phpmyadmin dump.sql file imports using python-mechanize  
		as described in <https://github.com/phpmyadmin/phpmyadmin/issues/17423#issuecomment-1268271930>  
		Only call this function when you have already found a 'timeout_passed=' string in browser response 
		(so you are sure the page contains a resubmit link)
		"""
	# https://stackoverflow.com/questions/3569622/python-mechanize-following-link-by-url-and-what-is-the-nr-parameter/3569707#3569707
	#link = br.find_link(url = resumeurl)
	link = br.find_link(text = "resubmit the same file")
	link.absolute_url = link.absolute_url.replace("&amp;","&").replace("?", "?db="+target_dbname+"&")

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import urllib.request
import json
## import textwrap

import sqlite3

database = sqlite3.connect(':memory:')

cur = database.cursor()

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# Converts a docx file with tables and images to (simple) HTML
# ORIGINAL CODE BY DAVID SSALI AT SOURCE: https://medium.com/@dvdssali/docx-to-html-1374eb6491a1
#
# Requires the Python module 'python-docx' <https://python-docx.readthedocs.io>
#
# Example use:
# >>> s = convert('./SOURCEDIR', 'SAMPLE.docx')
# >>> print(s)
# or
# $ python .\convert-docx-to-html.py > temp.html

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POSTing an item to /collections

First log in to get the JSESSIONID cookie and then post the item (I'm using httpie instead of curl):

$ http -f POST https://dspacetest.cgiar.org/rest/login [email protected] password=fuuuu
$ http https://dspacetest.cgiar.org/rest/status Cookie:JSESSIONID=EABAC9EFF942028AA52DFDA16DBCAFDE
$ http POST https://dspacetest.cgiar.org/rest/collections/f10ad667-2746-4705-8b16-4439abe61d22/items Cookie:JSESSIONID=EABAC9EFF942028AA52DFDA16DBCAFDE < item-object.json
HTTP/1.1 200 OK
Connection: keep-alive
Content-Encoding: gzip

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#!/usr/bin/env python
#
# Given the three points below, this code prints:
#
#   $ ~/src/geojson-test.py    
#   True
#   True
#   False
#
# Requires shapely to be installed in the virtual environment.

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# http://caddyserver.com/download
	
http://localhost:8080 {
  startup php.cmd &
  fastcgi / 127.0.0.1:9123 php
}

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import OpenSeadragon from 'openseadragon';
import * as Annotorious from '@recogito/annotorious-openseadragon';

import '@recogito/annotorious-openseadragon/dist/annotorious.min.css';

/*************************************************************************
 * 
 * Basic concept for this is from the official OpenCV docs: 
 * https://docs.opencv.org/3.4/dc/dcf/tutorial_js_contour_features.html
 *