Created
November 11, 2021 18:43
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library(tidyverse) | |
library(invertiforms) # RoheLab/invertiforms | |
library(igraphdata) | |
library(igraph) | |
library(RSpectra) | |
library(scales) | |
data("enron", package = "igraphdata") | |
A <- enron %>% | |
as_adjacency_matrix() | |
rank <- 10 | |
num_tau <- 10 | |
tau <- 10^seq(-2, 4, length.out = num_tau) | |
laplacians <- tibble(tau = tau) %>% | |
mutate( | |
scaler = map(tau, ~ RegularizedLaplacian(A, .x, .x)), | |
L_tau = map(scaler, ~ transform(.x, A)) | |
) | |
decomposed <- laplacians %>% | |
mutate( | |
svd = map(L_tau, svds, k = rank) | |
) | |
cumulative_participation <- function(U) { | |
sum(rowSums(U^2)^2) | |
} | |
localization <- decomposed %>% | |
mutate( | |
u = map_dbl(svd, ~ cumulative_participation(.x$u)), | |
v = map_dbl(svd, ~ cumulative_participation(.x$v)) | |
) | |
# these are the same now but might differ for rectangular A | |
mean_rs <- mean(rowSums(A)) | |
mean_cs <- mean(colSums(A)) | |
localization %>% | |
select(-scaler, -L_tau, -svd) %>% | |
gather(subspace, localization, u, v) %>% | |
ggplot() + | |
aes(tau, localization, color = subspace, group = subspace) + | |
geom_line() + | |
geom_vline(xintercept = mean_rs, linetype = "dashed") + | |
geom_vline(xintercept = mean_cs, linetype = "dashed") + | |
scale_color_viridis_d(begin = 0.15, end = 0.85) + | |
scale_x_log10( | |
breaks = trans_breaks("log10", function(x) 10^x), | |
labels = trans_format("log10", math_format(10^.x)) | |
) + | |
theme_minimal() |
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