Arun Seetharam aseetharam
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aseetharam
/ heatmap_pca_metabolomics.R
Last active
August 29, 2015 14:28
Clustering metabolomics data for different tissues from various location
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| library(Heatplus) | |
| library(vegan) | |
| library(RColorBrewer) | |
| library("gplots") | |
| all.data <- read.csv("C:/Users/Arun Seetharam/OneDrive/PostDoc/Projects/20150303_Perera_metabolomics/bloodroot_data_v2d.csv", quote="") | |
| row.names(all.data) <- all.data$ID | |
| all.data <- all.data[, -1] | |
| data.prop <- all.data/rowSums(all.data) | |
| scaleyellowred <- colorRampPalette(c("lightyellow", "red"), space = "rgb")(100) | |
| heatmap(as.matrix(data.prop), Rowv = NA, Colv = NA, col = scaleyellowred) |
aseetharam
/ notebook_launcher.py
Created
June 24, 2014 16:42
— forked from timo/notebook_launcher.py
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| """============================== | |
| Branded IPython Notebook Launcher | |
| ================================= | |
| Executing this module will create an overlay over ipython notebooks own static | |
| files and templates and overrides static files and templates and copies over all | |
| example notebooks into a temporary folder and launches the ipython notebook server. | |
| You can use this to offer an interactive tutorial for your library/framework/... |
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