Stefan Negru blankdots

I hereby claim:

To claim this, I am signing this object:

	"""Get information on Gitlab projects
	"""
	from typing import AsyncGenerator, Dict
	import httpx
	import logging
	import click
	import sys
	import asyncio
	from datetime import datetime

	openapi: 3.0.0
	info:
	description: SDA orchestrator API for standalone Sensitive Data Archive
	version: "1.0"
	title: SDA Orchestrator API
	license:
	name: Apache 2.0
	url: http://www.apache.org/licenses/LICENSE-2.0
	tags:
	- name: trigger

	FROM debian:10-slim

	## Otherwise Java won't install
	RUN mkdir -p /usr/share/man/man1

	RUN apt-get update \
	&& apt-get install -y gnupg2

	## This is to get openjdk-11-jre to install on -slim
	RUN apt-key adv --keyserver keyserver.ubuntu.com --recv-keys EA8CACC073C3DB2A

	# this script works in both MacOS and Linux
	.PHONY: upload submit user
	SHELL := /bin/bash

	DOCKER_PATH=$(shell pwd)

	#GPG_EXEC=/usr/local/gnupg-2.2/bin/gpg2
	GPG_EXEC=/usr/bin/gpg2
	SSH_KEY_PUB=~/.ssh/dummy.key.pub
	SSH_KEY_PRIV=~/.ssh/dummy.key

	.PHONY: upload submit user

	DOCKER_PATH=/home/stenegru/Software/test/LocalEGA/deployments/docker
	GPG_EXEC=/usr/bin/gpg2
	# GPG_EXEC=gpg
	SSH_KEY_PUB=~/.ssh/dummy.key.pub
	SSH_KEY_PRIV=~/.ssh/dummy.key

	INSTANCE_PORT=$(shell awk -F= '/DOCKER_PORT_inbox/ {print $$2}' $(DOCKER_PATH)/bootstrap/settings/swe1)
	GPG_HOME=$(DOCKER_PATH)/private/swe1/gpg

	We can take inspiration in the visualisation from such a platform: https://github.com/refinery-platform/refinery-platform

	short poster: Interactive Visualization of Provenance Graphs for Reproducible Biomedical Research http://gehlenborg.com/wp-content/uploads/refinery_poster_biovis-2015.pdf
	or: SATORI: A System for Ontology-Guided Visual Exploration of Biomedical Data Repositories http://www.biorxiv.org/content/biorxiv/early/2016/04/05/046755.full.pdf

	or more visualisation examples:

	https://flekschas.github.io/d3-list-graph/
	https://github.com/Data2Semantics/provoviz
	http://www.caleydo.org/publications/2016_eurovis_avocado/ with: http://demo.caleydo.org/pathfinder/

	from rdflib import ConjunctiveGraph, URIRef, Literal
	from SPARQLWrapper import SPARQLWrapper, JSON
	# import json
	#http://rdfextras.readthedocs.io/en/latest/working_with.html


	graph = ConjunctiveGraph()

	sparql = SPARQLWrapper("http://localhost:3030/ds/query")
	# add a default graph, though that can also be in the query string

	[pylama]
	linters = mccabe,pep257,pep8,pyflakes
	ignore = D203,D212,D213,D404,D406,D407,D408,D409,D100,D104
	max_line_length = 160

	[pylama:pycodestyle]
	max_line_length = 300

	[pylama:pylint]
	max_line_length = 300