blankdots’s gists

blankdots / x

Created January 18, 2009 21:00

blankdots.com

	/*
	=skin=
	@name izu
	@author blankdots
	@homepage http://www.blankdots.com
	@email [email protected]
	@license MPL/LGPL/GPL
	=/skin=
	*/

blankdots / test.php

Created October 16, 2009 20:09

CodeIgniter Demo

	/**
	Distributed under the MIT License :

	Copyright (c) 2009 <http://blankdots.com>

	Permission is hereby granted, free of charge, to any person
	obtaining a copy of this software and associated documentation
	files (the "Software"), to deal in the Software without
	restriction, including without limitation the rights to use,
	copy, modify, merge, publish, distribute, sublicense, and/or sell

blankdots / inde_view.php

Created October 16, 2009 20:10

CodeIgniter Demo

	<!--
	Distributed under the MIT License :

	Copyright (c) 2009 <http://blankdots.com>

	Permission is hereby granted, free of charge, to any person
	obtaining a copy of this software and associated documentation
	files (the "Software"), to deal in the Software without
	restriction, including without limitation the rights to use,
	copy, modify, merge, publish, distribute, sublicense, and/or sell

blankdots / script.py

Created October 16, 2009 20:11

Feeltagged - Arduino project for HCI class

	#Distributed under the MIT License :

	#Copyright (c) 2009 <http://blankdots.com>

	#Permission is hereby granted, free of charge, to any person
	#obtaining a copy of this software and associated documentation
	#files (the "Software"), to deal in the Software without
	#restriction, including without limitation the rights to use,
	#copy, modify, merge, publish, distribute, sublicense, and/or sell
	#copies of the Software, and to permit persons to whom the

blankdots / sketch.pde

Created October 16, 2009 20:13

Feeltagged - Arduino project for HCI class

	/**

	Feeltagged - Arduino research project

	Distributed under the MIT License :

	Copyright (c) 2009 <http://blankdots.com>

	Permission is hereby granted, free of charge, to any person
	obtaining a copy of this software and associated documentation

blankdots / sparql queries

Created August 13, 2014 18:29

sparql queries

	http://sparqles.okfn.org/availability

	PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
	PREFIX owl: <http://www.w3.org/2002/07/owl#>
	PREFIX xsd: <http://www.w3.org/2001/XMLSchema#>
	PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
	PREFIX uni: <http://www.Department0.University0.edu/>
	PREFIX ub: <http://www.lehigh.edu/~zhp2/2004/0401/univ-bench.owl#>
	SELECT *
	WHERE { ?subject ?predicate ?object }

blankdots / genetic data.ipynb

Last active October 18, 2015 12:55

Software for Scientists - October 2015

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blankdots / pylama config

Last active October 29, 2019 05:45

pylama config

	[pylama]
	linters = mccabe,pep257,pep8,pyflakes
	ignore = D203,D212,D213,D404,D406,D407,D408,D409,D100,D104
	max_line_length = 160

	[pylama:pycodestyle]
	max_line_length = 300

	[pylama:pylint]
	max_line_length = 300

blankdots / sparqlwrapper.py

Last active January 30, 2017 18:04

template for construct and select to rdflib

	from rdflib import ConjunctiveGraph, URIRef, Literal
	from SPARQLWrapper import SPARQLWrapper, JSON
	# import json
	#http://rdfextras.readthedocs.io/en/latest/working_with.html


	graph = ConjunctiveGraph()

	sparql = SPARQLWrapper("http://localhost:3030/ds/query")
	# add a default graph, though that can also be in the query string

blankdots / visualisation.txt

Created March 21, 2017 09:15

	We can take inspiration in the visualisation from such a platform: https://github.com/refinery-platform/refinery-platform

	short poster: Interactive Visualization of Provenance Graphs for Reproducible Biomedical Research http://gehlenborg.com/wp-content/uploads/refinery_poster_biovis-2015.pdf
	or: SATORI: A System for Ontology-Guided Visual Exploration of Biomedical Data Repositories http://www.biorxiv.org/content/biorxiv/early/2016/04/05/046755.full.pdf

	or more visualisation examples:

	https://flekschas.github.io/d3-list-graph/
	https://github.com/Data2Semantics/provoviz
	http://www.caleydo.org/publications/2016_eurovis_avocado/ with: http://demo.caleydo.org/pathfinder/

Stefan Negru blankdots