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"""Get information on Gitlab projects
"""
from typing import AsyncGenerator, Dict
import httpx
import logging
import click
import sys
import asyncio
from datetime import datetime

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Keybase proof

I hereby claim:

• I am blankdots on github.
• I am blankdots (https://keybase.io/blankdots) on keybase.
• I have a public key ASC-cRq6uk6xRuuB5wtc9odLEQOZMU5F-VOy_s2VY6o62go

To claim this, I am signing this object:

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openapi: 3.0.0
info:
  description: SDA orchestrator API for standalone Sensitive Data Archive
  version: "1.0"
  title: SDA Orchestrator API
  license:
    name: Apache 2.0
    url: http://www.apache.org/licenses/LICENSE-2.0
tags:
  - name: trigger

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FROM debian:10-slim

## Otherwise Java won't install 
RUN mkdir -p /usr/share/man/man1

RUN apt-get update \
 && apt-get install -y gnupg2

## This is to get openjdk-11-jre to install on -slim
RUN apt-key adv --keyserver keyserver.ubuntu.com --recv-keys EA8CACC073C3DB2A

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# this script works in both MacOS and Linux
.PHONY: upload submit user
SHELL := /bin/bash

DOCKER_PATH=$(shell pwd)

#GPG_EXEC=/usr/local/gnupg-2.2/bin/gpg2
GPG_EXEC=/usr/bin/gpg2
SSH_KEY_PUB=~/.ssh/dummy.key.pub
SSH_KEY_PRIV=~/.ssh/dummy.key

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.PHONY: upload submit user

DOCKER_PATH=/home/stenegru/Software/test/LocalEGA/deployments/docker
GPG_EXEC=/usr/bin/gpg2
# GPG_EXEC=gpg
SSH_KEY_PUB=~/.ssh/dummy.key.pub
SSH_KEY_PRIV=~/.ssh/dummy.key

INSTANCE_PORT=$(shell awk -F= '/DOCKER_PORT_inbox/ {print $$2}' $(DOCKER_PATH)/bootstrap/settings/swe1)
GPG_HOME=$(DOCKER_PATH)/private/swe1/gpg

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We can take inspiration in the visualisation from such a platform: https://github.com/refinery-platform/refinery-platform

short poster: Interactive Visualization of Provenance Graphs for Reproducible Biomedical Research http://gehlenborg.com/wp-content/uploads/refinery_poster_biovis-2015.pdf
or: SATORI: A System for Ontology-Guided Visual Exploration of Biomedical Data Repositories http://www.biorxiv.org/content/biorxiv/early/2016/04/05/046755.full.pdf

or more visualisation examples:

https://flekschas.github.io/d3-list-graph/
https://github.com/Data2Semantics/provoviz
http://www.caleydo.org/publications/2016_eurovis_avocado/ with: http://demo.caleydo.org/pathfinder/

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from rdflib import ConjunctiveGraph, URIRef, Literal
from SPARQLWrapper import SPARQLWrapper, JSON
# import json
#http://rdfextras.readthedocs.io/en/latest/working_with.html


graph = ConjunctiveGraph()

sparql = SPARQLWrapper("http://localhost:3030/ds/query")
# add a default graph, though that can also be in the query string

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[pylama]
linters = mccabe,pep257,pep8,pyflakes
ignore = D203,D212,D213,D404,D406,D407,D408,D409,D100,D104
max_line_length = 160

[pylama:pycodestyle]
max_line_length = 300

[pylama:pylint]
max_line_length = 300

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