Test report for easybuilders/easybuild-easyconfigs#856
Build succeeded for 0 out of 2 (2 easyconfigs in this PR)
- FAIL (build issue) Perl-5.16.3-ictce-5.5.0.eb (partial log available at https://gist.github.com/1319d2acdc50dd444001)
- FAIL (build issue) VCFtools-0.1.11-ictce-5.5.0-Perl-5.16.3.eb (partial log available at https://gist.github.com/ff2cdb9b4b0a42b3a6f9)
- start: Sun, 18 May 2014 08:48:06 +0000 (UTC)
- end: Sun, 18 May 2014 09:01:47 +0000 (UTC)
- easybuild-framework version: 1.13.0dev
- easybuild-easyblocks version: 1.13.0dev
- command line:
eb --from-pr 856 --upload-test-report --robot --force --github-user=boegel --debug
- full configuration (includes defaults):
--buildpath=/user/home/gent/vsc400/vsc40023/.local/easybuild/build
--config=/user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_framework-1.13.0dev-py2.6.egg/easybuild/easybuild_config.py
--debug
--disable-allow-modules-tool-mismatch
--disable-avail-easyconfig-constants
--disable-avail-easyconfig-licenses
--disable-avail-easyconfig-params
--disable-avail-easyconfig-templates
--disable-avail-module-naming-schemes
--disable-avail-modules-tools
--disable-avail-repositories
--disable-dry-run
--disable-dry-run-short
--disable-experimental
--disable-ignore-osdeps
--disable-info
--disable-job
--disable-list-toolchains
--disable-logtostdout
--disable-pretend
--disable-quiet
--disable-recursive-module-unload
--disable-regtest
--disable-sequential
--disable-set-gid-bit
--disable-show-default-moduleclasses
--disable-skip
--disable-skip-test-cases
--disable-sticky-bit
--force
--from-pr=856
--github-user=boegel
--ignore-dirs=.git,.svn
--installpath=/user/home/gent/vsc400/vsc40023/.local/easybuild
--logfile-format=easybuild,easybuild-%(name)s-%(version)s-%(date)s.%(time)s.log
--module-naming-scheme=EasyBuildModuleNamingScheme
--moduleclasses=bio,chem,data,devel,ide,lib,mpi,perf,system,tools
--modules-tool=EnvironmentModulesC
--oldstyleconfig
--repository=FileRepository
--repositorypath=/user/home/gent/vsc400/vsc40023/.local/easybuild/ebfiles_repo
--robot=/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages/easybuild_easyconfigs-1.13.0.0dev-py2.6.egg/easybuild/easyconfigs
--sourcepath=/user/home/gent/vsc400/vsc40023/.local/easybuild/sources
--strict=warn
--subdir-modules=modules
--subdir-software=software
--tmp-logdir=/local/12893[856].master16.delcatty.gent.vsc
--upload-test-report
- core count: 16
- cpu model: Intel(R) Xeon(R) CPU E5-2670 0 @ 2.60GHz
- cpu speed: 2599.945
- cpu vendor: Intel
- gcc version: Using built-in specs.; Target: x86_64-redhat-linux; Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux; Thread model: posix; gcc version 4.4.7 20120313 (Red Hat 4.4.7-4) (GCC) ;
- glibc version: 2.12
- hostname: node2157.delcatty.os
- kernel name: Linux
- os name: SL
- os type: Linux
- os version: 6.5
- platform name: x86_64-unknown-linux
- python version: 2.6.6 (r266:84292, Jan 22 2014, 05:06:49) ; [GCC 4.4.7 20120313 (Red Hat 4.4.7-3)]
- system gcc path: /usr/bin/gcc
- system python path: /usr/bin/python
- cluster/delcatty
EASYBUILDBUILDPATH = /tmp/vsc40023/easybuild_build
EASYBUILDPREFIX = /user/scratchdelcatty/gent/vsc400/vsc40023/easybuild_REGTEST/SL6/sandybridge
EASYBUILDSOURCEPATH = /user/data/gent/vsc400/vsc40023/EasyBuild/sources:/apps/gent/source:/nfsmuk/apps/gent/source/
ENVIRONMENT = BATCH
G_BROKEN_FILENAMES = 1
HISTCONTROL = ignoredups
HISTSIZE = 1000
HOME = /user/home/gent/vsc400/vsc40023
HOSTNAME = node2157.delcatty.os
LANG = en_US.utf8
LC_ALL = en_US.utf8
LESSOPEN = |/usr/bin/lesspipe.sh %s
LOADEDMODULES = cluster/delcatty
LOGNAME = vsc40023
MAIL = /var/spool/mail/vsc40023
MODULEPATH = /etc/modulefiles/vsc:/user/scratchdelcatty/gent/vsc400/vsc40023/easybuild_REGTEST/SL6/sandybridge/modules/all
MODULESHOME = /usr/share/Modules
NUM_PROCS = 16
PATH = /user/home/gent/vsc400/vsc40023/lmod/5.1.5/libexec:/user/home/gent/vsc400/vsc40023/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/opt/ibutils/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin
PBS_ARRAYID = 856
PBS_DEFAULT = master15.delcatty.gent.vsc
PBS_ENVIRONMENT = PBS_BATCH
PBS_GPUFILE = /var/spool/pbs/aux//12893[856].master16.delcatty.gent.vscgpu
PBS_JOBCOOKIE = 6B4D7ED8481A9D09F71F7673A99066DC
PBS_JOBID = 12893[856].master16.delcatty.gent.vsc
PBS_JOBNAME = eb_test_pr.sh-856
PBS_MICFILE = /var/spool/pbs/aux//12893[856].master16.delcatty.gent.vscmic
PBS_MOMPORT = 15003
PBS_NODEFILE = /var/spool/pbs/aux//12893[856].master16.delcatty.gent.vsc
PBS_NODENUM = 0
PBS_NP = 16
PBS_NUM_NODES = 1
PBS_NUM_PPN = 16
PBS_O_HOME = /user/home/gent/vsc400/vsc40023
PBS_O_HOST = gligar03.gligar.gent.vsc
PBS_O_LANG = en_US.utf8
PBS_O_LOGNAME = vsc40023
PBS_O_MAIL = /var/spool/mail/vsc40023
PBS_O_PATH = /user/home/gent/vsc400/vsc40023/lmod/5.1.5/libexec:/user/home/gent/vsc400/vsc40023/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/opt/ibutils/bin:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/bin:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/bin
PBS_O_QUEUE = default
PBS_O_SERVER = master16.delcatty.gent.vsc
PBS_O_SHELL = /bin/bash
PBS_O_SUBMIT_FILTER = /usr/bin/submitfilter
PBS_O_WORKDIR = /vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023
PBS_QUEUE = short
PBS_TASKNUM = 1
PBS_VERSION = TORQUE-4.2.7
PBS_VNODENUM = 0
PBS_WALLTIME = 36000
PWD = /vscmnt/gent_vulpix/_/user/home/gent/vsc400/vsc40023
PYTHONPATH = /user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib/python2.6/site-packages:/user/scratch/gent/vsc400/vsc40023/easybuild_easy_installed/lib64/python2.6/site-packages:/user/home/gent/vsc400/vsc40023/.local/lib/python2.6/site-packages:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib/python2.6/site-packages:/user/home/gent/vsc400/vsc40023/scratch/easybuild_easy_installed/lib64/python2.6/site-packages
SHELL = /bin/bash
SHLVL = 3
TMPDIR = /local/12893[856].master16.delcatty.gent.vsc
USER = vsc40023
VSCPROFILELOADED = 1
VSC_ARCH_LOCAL = sandybridge
VSC_DATA = /user/data/gent/vsc400/vsc40023
VSC_DATA_VO = /user/data/gent/gvo000/gvo00002
VSC_DATA_VO_USER = /user/data/gent/gvo000/gvo00002/vsc40023
VSC_HOME = /user/home/gent/vsc400/vsc40023
VSC_INSTITUTE = gent
VSC_INSTITUTE_CLUSTER = delcatty
VSC_INSTITUTE_LOCAL = gent
VSC_OS_LOCAL = SL6
VSC_SCRATCH = /user/scratch/gent/vsc400/vsc40023
VSC_SCRATCHGULPIN = /user/scratchgulpin/gent/vsc400/vsc40023
VSC_SCRATCH_CLUSTER = /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023
VSC_SCRATCH_DELCATTY = /user/scratchdelcatty/gent/vsc400/vsc40023
VSC_SCRATCH_DELCATTY_VO = /user/scratchdelcatty/gent/gvo000/gvo00002
VSC_SCRATCH_DELCATTY_VO_USER = /user/scratchdelcatty/gent/gvo000/gvo00002/vsc40023
VSC_SCRATCH_GENGAR = /user/scratchgengar/gent/vsc400/vsc40023
VSC_SCRATCH_GENGAR_VO = /user/scratchgengar/gent/gvo000/gvo00002
VSC_SCRATCH_GENGAR_VO_USER = /user/scratchgengar/gent/gvo000/gvo00002/vsc40023
VSC_SCRATCH_GULPIN = /user/scratchgulpin/gent/vsc400/vsc40023
VSC_SCRATCH_GULPIN_VO = /user/scratchgulpin/gent/gvo000/gvo00002
VSC_SCRATCH_GULPIN_VO_USER = /user/scratchgulpin/gent/gvo000/gvo00002/vsc40023
VSC_SCRATCH_NODE = /local
VSC_SCRATCH_SITE = /user/scratch/gent/vsc400/vsc40023
VSC_SCRATCH_VO = /user/scratch/gent/gvo000/gvo00002
VSC_SCRATCH_VO_USER = /user/scratch/gent/gvo000/gvo00002/vsc40023
VSC_VO = gvo00002
_ = /usr/bin/python
_LMFILES_ = /etc/modulefiles/vsc/cluster/delcatty
module = () { eval `/usr/bin/modulecmd bash $*`
}