cfbastarz

Implementação Pré-Operacional do SMNA — Egeon

Resumo: Este guia explica, de ponta a ponta, como obter, configurar, compilar e executar o ciclo pré-operacional do SMNA (BAM + GSI) no Egeon.

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🚀 Início rápido (cheatsheet)

# 0) Obter a tag estável

cfbastarz

# Code checkout 

git clone --recursive https://github.com/dtcenter/MPAS-Model.git

cd MPAS-Model
git checkout remotes/origin/gsl/MPAS_stoch_physics

cd src/core_atmosphere
rm -rf stochastic_physics

cfbastarz

Publish a Complex Package to PyPi

By a complex package, I mean a package with pure Python code as well as code in other languages like C, Fortran, etc.

Note: I am assuming that your setup.py already works, and I will show you how to create a manylinux Python wheel. You will need Docker for this.

The manylinux Wheel 🛞

To create a distribution of your Python package with statically linked libraries (i.e., a self-contained package), you need to use a Linux distribution that provides all necessary dependencies. This is where manylinux comes in handy.

cfbastarz

Publish a Simple Package to PyPi

A guide on how to publish a simple package (i.e., pure Python) to PyPi.

Set Up Your ~/.pypirc

First, set up your ~/.pypirc to make things a little easier:

[distutils]

cfbastarz

#! /bin/bash -x

#SBATCH --output=/mnt/beegfs/carlos.bastarz/oensMB09/recanl/output/setrecanlANLSMT.TQ0126L042.2020090100.Linux.23112411:33.out
#SBATCH --error=/mnt/beegfs/carlos.bastarz/oensMB09/recanl/output/setrecanlANLSMT.TQ0126L042.2020090100.Linux.23112411:33.err
#SBATCH --time=00:30:00
#SBATCH --tasks-per-node=1
#SBATCH --nodes=1
#SBATCH --job-name=RECANL
#SBATCH --partition=PESQ1

cfbastarz

#! /bin/bash -x

#SBATCH --output=/mnt/beegfs/carlos.bastarz/oensMB09/model/exec_SMT2020052600.NMC/setout/Out.model.2020052600.MPI64.out
#SBATCH --error=/mnt/beegfs/carlos.bastarz/oensMB09/model/exec_SMT2020052600.NMC/setout/Out.model.2020052600.MPI64.err
#SBATCH --time=04:00:00
#SBATCH --tasks-per-node=64
#SBATCH --nodes=1
#SBATCH --job-name=BAMNMC
#SBATCH --partition=PESQ1

cfbastarz

akonadi stop
sudo apt-get install akonadi-server akonadi-backend-postgresql
cd $HOME/.config/akonadi/
cp akonadiserverrc akonadiserverrc.bak
cat << EOF > $HOME/.config/akonadi/akonadiserverrc
[Debug]
Tracer=null

[%General]
Driver=QPSQL

cfbastarz

ffmpeg -i "2023-10-02 13-42-57.mkv" -vn -c:a libmp3lame -y "2023-10-02 13-42-57.mp3"

cfbastarz

# Chop the figures (in my case, figures were in landscape mode)
for i in $(ls *.png); do j=$(echo $i | sed "s,.png,-chop.png,g"); convert $i -gravity South -chop 0x10 -gravity North -chop 0x50 -gravity East -chop 296x0 -gravity West -chop 296x0 $j; done

# Rotate the figures 90 degrees (clockwise)
for i in $(ls *-chop.png); do j=$(echo $i | sed "s,-chop.png,-chop-rot90.png,g"); convert $i -rotate 90 $j; done

# Convert all figures to PDF
for i in $(ls *-chop-rot90.png); do j=$(echo $i | sed "s,-chop-rot90.png,.pdf,g"); convert $i $j; done

# Unite all PDF (21) files into one

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#! /bin/bash

inctime=/home/carlos.bastarz/bin/inctime

res=TQ0299L064
pfx=CPT

bpath=/mnt/beegfs/carlos.bastarz/SMNA-Oper/SMG/datainout/bam/pos/dataout

datai=2019111512