Update BEL Resources on Artifactory with Selventa Generator

update_resources.sh

#!/usr/bin bash

mkdir output

# Download and install pybel-tools 
git clone https://github.com/pybel/pybel-tools
cd pybel-tools
python3 -m pip install --user .

cd ..

# Download resource generator repository
git clone https://github.com/pybel/resource-generator

# Download and output namespaces
./resource-generator/gp_baseline.py -vv -n ./output

# Download and output annotations
./resource-generator/belanno.py -n ./output

# Upload resources to artifactory
python3 -m pybel_tools upload_resources ./output

This script should do the job of downloading all of the scripts, running them, and deploying it to artifactory, assuming the environment variables ARTY_USERNAME and ARTY_PASSWORD are set @cebel @jd-s