cthoyt

cthoyt

cthoyt

"""Calculate the number of possible mappings between bioregistry entries."""

from itertools import combinations

from bioregistry.external.getters import GETTERS
from bioregistry.version import VERSION
from humanize import intword


def main():

cthoyt

#defaultView:Graph

SELECT ?s ?sLabel ?rgb ?edgelabel ?o ?oLabel
WHERE {
  {
    SELECT ?s ?sLabel ?rgb ?o ?oLabel
    WHERE {
      ?o wdt:P50 wd:Q47475003, ?s .
      FILTER (?s != wd:Q47475003)
      OPTIONAL {

cthoyt

cthoyt

from pathlib import Path

import pandas as pd

import pybiopax

ALL_PATHWAYS = "https://reactome.org/download/current/ReactomePathways.txt"


def download_reactome(directory):

cthoyt

import tabulate

import bioregistry


def main():
    """Generate a curation sheet for URL format strings with problematic trailing slashes."""
    rows = []
    for prefix, resource in bioregistry.read_registry().items():
        format_url = resource.get_format()

cthoyt

"""Generate PyKEEN model tweets."""

from textwrap import dedent

import click
from docdata import get_docdata

from pykeen.models import model_resolver

cthoyt

from typing import Optional

import requests


def has_topic(owner: str, repo: str, topic: str, token: Optional[str] = None) -> bool:
    """Check if the given GitHub repository has the given topic.

    :param owner: The name of the owner/organization for the repository.
    :param repo: The name of the repository.

cthoyt

"""

This script blasts all of the OBO Foundry Repositories with a given issue.
Use sparingly.

 ______________________________ 
/ with great power comes great \
\ responsibility               /
 ------------------------------ 
        \   ^__^