Created
November 25, 2024 14:42
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Snakemake hanging
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| RuleException: | |
| CalledProcessError in file /home/babujee/milkviruses_92224/workflow/irma.smk, line 239: | |
| Command 'set -euo pipefail; cat > results/primary/seq/milkvirus4_S4_combined/aa.fasta' died with <Signals.SIGINT: 2>. | |
| File "/home/babujee/milkviruses_92224/workflow/irma.smk", line 239, in __rule_concat_segment_aa | |
| File "/usr/lib/python3.10/concurrent/futures/thread.py", line 58, in run | |
| RuleException: | |
| CalledProcessError in file /home/babujee/milkviruses_92224/workflow/irma.smk, line 250: | |
| Command 'set -euo pipefail; cat > results/primary/seq/milkvirus4_S4_combined/nt.fasta' died with <Signals.SIGINT: 2>. | |
| File "/home/babujee/milkviruses_92224/workflow/irma.smk", line 250, in __rule_concat_segment_nt | |
| File "/usr/lib/python3.10/concurrent/futures/thread.py", line 58, in run | |
| RuleException: | |
| CalledProcessError in file /home/babujee/milkviruses_92224/workflow/irma.smk, line 533: | |
| Command 'set -euo pipefail; cat > results/primary/qsr/milkvirus4_S4/tensqr_ViralSeq.fasta' died with <Signals.SIGINT: 2>. | |
| File "/home/babujee/milkviruses_92224/workflow/irma.smk", line 533, in __rule_collect_qsr_sequences_for_all_segments | |
| File "/usr/lib/python3.10/concurrent/futures/thread.py", line 58, in run |
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