davipatti

#!/usr/bin/env python3

from typing import Annotated, Union
import io
import json
import requests

from fastapi import FastAPI, Query
from fastapi.responses import Response
from PIL import Image, ImageOps

davipatti

import marimo

__generated_with = "0.11.30"
app = marimo.App(width="medium")


@app.cell
def _():
    import marimo as mo
    return (mo,)

davipatti

~/g/grounding-dino-tiny-ONNX[1]►imxconv-pt -i grounding-dino-tiny-ONNX/onnx/model.onnx -o imx500-conversion                                                          ghog-env 1.002s 08:22
2025-03-14 08:22:54,326 INFO : Running version 1.10.0 [~/.virtualenvs/ghog-env/lib/python3.10/site-packages/uni/common/logger.py:148]
2025-03-14 08:22:54,326 INFO : Converting grounding-dino-tiny-ONNX/onnx/model.onnx [~/.virtualenvs/ghog-env/lib/python3.10/site-packages/uni/common/logger.py:148]
2025-03-14 08:22:57,705 ERROR : CODE: [EXEC] 'NoneType' object cannot be interpreted as an integer [~/.virtualenvs/ghog-env/lib/python3.10/site-packages/uni/common/logger.py:160]
Traceback (most recent call last):
  File "~/.virtualenvs/ghog-env/lib/python3.10/site-packages/uni/common/main.py", line 143, in execute
    g, metadata = self.convert_model(args.input_path, vis_dir)
  File "~/.virtualenvs/ghog-env/lib/python3.10/site-packages/uni/common/main.py", line 61, in convert_model
    parser = self.get_parser(model_path, vis_dir)
  

davipatti

RuleException:
CalledProcessError in file /home/babujee/milkviruses_92224/workflow/irma.smk, line 239:
Command 'set -euo pipefail;  cat  > results/primary/seq/milkvirus4_S4_combined/aa.fasta' died with <Signals.SIGINT: 2>.
  File "/home/babujee/milkviruses_92224/workflow/irma.smk", line 239, in __rule_concat_segment_aa
  File "/usr/lib/python3.10/concurrent/futures/thread.py", line 58, in run
RuleException:
CalledProcessError in file /home/babujee/milkviruses_92224/workflow/irma.smk, line 250:
Command 'set -euo pipefail;  cat  > results/primary/seq/milkvirus4_S4_combined/nt.fasta' died with <Signals.SIGINT: 2>.
  File "/home/babujee/milkviruses_92224/workflow/irma.smk", line 250, in __rule_concat_segment_nt
  File "/usr/lib/python3.10/concurrent/futures/thread.py", line 58, in run

davipatti

Building wheels for collected packages: connection-pool, datrie
  Building wheel for connection-pool (setup.py) ... done
  Created wheel for connection-pool: filename=connection_pool-0.0.3-py3-none-any.whl size=4062 sha256=3e72f96c62dc89f5af94648812515626414f510305e2ee911aadc70999a2f8fc
  Stored in directory: /home/babujee/.cache/pip/wheels/c6/4e/3d/7d5324ada36b1473e54d32916a8f70b90b62c9f2fedc9fd8c9
  Building wheel for datrie (pyproject.toml) ... error
  error: subprocess-exited-with-error

  × Building wheel for datrie (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> [44 lines of output]

davipatti

davipatti

#!/usr/bin/env python3

from collections import defaultdict
from itertools import chain


def find_maximal_subsets(sets: list[set]) -> set[frozenset]:
    """
    Find the maximal subsets of items that always appear together in a group of sets.

davipatti

#!/usr/bin/env python3

import random
import matplotlib.pyplot as plt

numbers = tuple(range(100))


def trial(N: int) -> bool:
    S = random.choices(numbers, k=N)

davipatti

def rename_coordinates(dataset: "xarray.Dataset", dim: str, mapping: dict[str, str]) -> "xarray.Dataset":
    return dataset.assign_coords(**{dim: [mapping[k] for k in dataset.coords[dim].values]})
  

davipatti