Install R with OpenBLAS via Homebrew

install-r.sh

# Stat Installation

# XCode CLT
xcode-select --install

# Update Homebrew
brew update

# Check for broken dependencies and/or outdated packages
brew doctor
brew prune

# R
brew install openblas --with-openmp
brew install r --with-openblas

echo ".libPaths('~/Library/R/3.4/library')" >> ~.RProfile

# data.table with enabled OpenMP
brew install llvm
echo 'export PATH="/usr/local/opt/llvm/bin:$PATH"' >> ~/.bashrc
mkdir ~/.R
echo "CC=/usr/local/opt/llvm/bin/clang -fopenmp
CXX=/usr/local/opt/llvm/bin/clang++
# -O3 should be faster than -O2 (default) level optimisation .
CFLAGS=-g -O3 -Wall -pedantic -std=gnu99 -mtune=native -pipe
CXXFLAGS=-g -O3 -Wall -pedantic -std=c++11 -mtune=native -pipe
LDFLAGS=-L/usr/local/opt/gettext/lib -L/usr/local/opt/llvm/lib -Wl,-rpath,/usr/local/opt/llvm/lib
CPPFLAGS=-I/usr/local/opt/gettext/include -I/usr/local/opt/llvm/include" >> ~/.R/Makevars

# data.table
R --vanilla << EOF
install.packages('data.table', repos='https://cloud.r-project.org/')
q()
EOF

rm ~/.R/Makevars
echo "CC=/usr/local/opt/llvm/bin/clang
CXX=/usr/local/opt/llvm/bin/clang++" >> ~/.R/Makevars

# devtools
R --vanilla << EOF
install.packages('devtools', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# testthat
R --vanilla << EOF
install.packages('testthat', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# roxygen2
R --vanilla << EOF
install.packages('roxygen2', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# rlang
R --vanilla << EOF
install.packages('rlang', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# knitr
R --vanilla << EOF
install.packages('knitr', dependencies=TRUE, repos='https://cloud.r-project.org/')
q()
EOF

# rmarkdown
R --vanilla << EOF
install.packages('rmarkdown', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# bookdown
R --vanilla << EOF
install.packages('bookdown', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# tidyverse
R --vanilla << EOF
install.packages('tidyverse', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# ggrepel
R --vanilla << EOF
install.packages('ggrepel', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# gganimate
R --vanilla << EOF
install.packages('gganimate', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# ggthemes
R --vanilla << EOF
install.packages('ggthemes', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# ggmap
R --vanilla << EOF
install.packages('ggmap', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# RColoBrewer
R --vanilla << EOF
install.packages('RColorBrewer', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# dendextend
R --vanilla << EOF
install.packages('dendextend', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# kml3d
R --vanilla << EOF
install.packages('kml3d', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# GDAtools
R --vanilla << EOF
install.packages('GDAtools', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# FactoMineR
R --vanilla << EOF
install.packages('FactoMineR', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# FactoInvestigate
R --vanilla << EOF
install.packages('FactoInvestigate', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# missMDA
R --vanilla << EOF
install.packages('missMDA', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# factoextra
R --vanilla << EOF
install.packages('factoextra', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# showtext
R --vanilla << EOF
install.packages('showtext', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# sysfonts
R --vanilla << EOF
install.packages('sysfonts', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# Hmisc
R --vanilla << EOF
install.packages('Hmisc', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# explor
R --vanilla << EOF
install.packages('explor', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# questionr
R --vanilla << EOF
install.packages('questionr', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# archivist
R --vanilla << EOF
install.packages('archivist', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# archivist.github
R --vanilla << EOF
install.packages('archivist.github', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# shiny
R --vanilla << EOF
install.packages('shiny', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# learnr
R --vanilla << EOF
install.packages('learnr', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# pacman
R --vanilla << EOF
install.packages('pacman', dependencies=TRUE,
repos='https://cloud.r-project.org/')
q()
EOF

# TimeSpaceAnalysis
R --vanilla << EOF
pacman::p_install_gh("inventionate/TimeSpaceAnalysis", dependencies=TRUE)
q()
EOF