Douglas Russell dpwrussell

CLI Examples for MathWorks' Reference Architectures

These are examples of creating and deleting reference architectures for three MathWorks offerings; MATLAB, MATLAB Parallel Server and Network License Manager for MATLAB. There are examples for both AWS and Azure.

In each of the examples, the minimum parameters are supplied. The values for each parameter are specific to your AWS account and the deployment you with to create, so they should be set by the user. The documentation (linked to from each of the examples) goes into details of all possible parameters

Example Usage:

Create/Update/Delete of a batch cluster and job queue requires a YAML configuration file of the following shape.

Note: These values are not the actual values for our account.

Region: us-east-1
StackPrefix: stack-name

Example Usage:

python create_aws_user.py newuser \
  --group ComputationalScientist \
  --group SUDOers

This outputs a block of text which should be communicated to the user.

OMERO User Meeting 2017 AWS Workshop

https://tinyurl.com/ydz73puv

What is Docker?

...an open source project to pack, ship and run any application as a lightweight container.
An abstraction layer to "containerize" any application and allow it to run on any infrastructure
Used to containerize OMERO, OMERO.web and and the additional components of OMERO.cloudarchive

	FROM ubuntu:22.04

	RUN apt-get update \
	&& export DEBIAN_FRONTEND=noninteractive \
	&& apt-get -y install \
	--no-install-recommends \
	db5.3-util \
	bzip2 \
	libdb++ \
	libexpat1 \

	*.sql
	*.p12
	*.key
	*.pem
	*.crt
	*.jks
	.env

	FROM ubuntu:20.10
	RUN apt-get -y update
	RUN apt-get install -y python3 xvfb
	ADD main.py main.py
	CMD python3 main.py & python3 main.py

	.classpath
	.settings/
	target/
	.project

	FROM ubuntu

	RUN apt-get -y update \
	&& apt-get -y install xauth \
	&& apt-get -y install libxt6 libxtst6 libgtk2.0-0 libnss3 libx11-xcb1 libxss1 libasound2 \
	&& apt-get -y install x11-apps \
	&& rm -rf /var/lib/apt/lists/*

	#!/usr/bin/env python3

	import os
	import re

	r = re.compile(r'(\w\s-\s\d\d\(fld\s\d\swv\s\w+\s-\s[\w]+-\stime)(\s\d+)(\s-\s\d+\sms)(\)\.tif)')

	d = os.path.abspath('files/')

	all_files = [f for f in os.listdir(d) if os.path.isfile(os.path.join(d, f))]