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w_0 = 0 | |
b_0 = 0 | |
adam = AdamOptim() | |
t = 1 | |
converged = False | |
while not converged: | |
dw = grad_function(w_0) | |
db = grad_function(b_0) | |
w_0_old = w_0 |
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def loss_function(m): | |
return m**2-2*m+1 | |
## take derivative | |
def grad_function(m): | |
return 2*m-2 | |
def check_convergence(w0, w1): | |
return (w0 == w1) |
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import numpy as np | |
class AdamOptim(): | |
def __init__(self, eta=0.01, beta1=0.9, beta2=0.999, epsilon=1e-8): | |
self.m_dw, self.v_dw = 0, 0 | |
self.m_db, self.v_db = 0, 0 | |
self.beta1 = beta1 | |
self.beta2 = beta2 | |
self.epsilon = epsilon | |
self.eta = eta | |
def update(self, t, w, b, dw, db): |
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from torch_metrics import MSEMetric, MAEMetric, RSquaredMetric | |
import torch | |
metric = MSEMetric() | |
t1 = torch.tensor([1., 2., 3.]) | |
t2 = torch.tensor([1., 5., 25.]) | |
print(metric(t1, t2)) |
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class GeneratorUNet(nn.Module): | |
def __init__(self, in_channels=1, out_channels=1): | |
super(GeneratorUNet, self).__init__() | |
self.down1 = UNetDown(in_channels, 64, normalize=False) | |
self.down2 = UNetDown(64, 128) | |
self.down3 = UNetDown(128, 256) | |
self.down4 = UNetDown(256, 512) | |
self.mid1 = UNetMid(1024, 512, dropout=0.2) | |
self.mid2 = UNetMid(1024, 512, dropout=0.2) |
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class diceloss(torch.nn.Module): | |
def init(self): | |
super(diceLoss, self).init() | |
def forward(self,pred, target): | |
smooth = 1. | |
iflat = pred.contiguous().view(-1) | |
tflat = target.contiguous().view(-1) | |
intersection = (iflat * tflat).sum() | |
A_sum = torch.sum(iflat * iflat) | |
B_sum = torch.sum(tflat * tflat) |
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# --------------------- | |
# Train Discriminator, only update every disc_update batches | |
# --------------------- | |
# Real loss | |
fake_B = generator(real_A) | |
pred_real = discriminator(real_B, real_A) | |
loss_real = criterion_GAN(pred_real, valid) | |
# Fake loss | |
pred_fake = discriminator(fake_B.detach(), real_A) |
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#***********************# | |
#***Code by:************# | |
#***Chi Nok Enoch Kan***# | |
#***********************# | |
#*******<(^.^)>*********# | |
#***********************# | |
#*****Encoder Block*****# | |
#***********************# | |
#***********************# | |
#***********************# |
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import miptools as mt | |
#metadata windowing | |
mt.preprocess('./data/test.dcm', org='brain', windowing='simple', resample=False, visualize=True) | |
#bsb windowing | |
mt.preprocess('./data/test.dcm', org='brain', windowing='bsb', resample=False, visualize=True) | |
#sigmoid windowing | |
mt.preprocess('./data/test.dcm', org='brain', windowing='sigmoid', resample=False, visualize=True) |