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@icaoberg
icaoberg / rrename.sh
Last active January 28, 2025 10:13
Rename file with a random filename using uuidgen
#!/bin/bash
# Enable nullglob so patterns that don't match anything expand to null
shopt -s nullglob
# Check if a file name is provided as an argument
if [ -z "$1" ]; then
echo "Error: No file specified. Please provide a file name as an argument."
exit 1
fi
@icaoberg
icaoberg / asana.py
Last active January 15, 2025 09:50
Top 10 Asana Tasks
import os
import asana
from pathlib import Path
from tqdm import tqdm
import pandas as pd
import warnings
warnings.filterwarnings("ignore")
# This script fetches tasks from Asana and displays the top 10 incomplete tasks with due dates.
@icaoberg
icaoberg / sq
Last active January 15, 2025 09:49
A better version of squeue (for me)
#!/bin/bash
# Alias: sq
# This alias is a shorthand for a customized display of job information using the 'squeue' command.
# Command:
# squeue -o "%.18i %.9P %.50j %.8u %.2t %.10M %.6D %R"
# Description of the 'squeue' options:
# - 'squeue': A command used to view information about jobs in the Slurm workload manager.
@icaoberg
icaoberg / script.sh
Last active December 26, 2021 02:42
Fill metadata on mp3 files
for F in *.mp3
do
ALBUM='Room Service (Extended Version)'
ARTIST='Roxette'
SONG=$(basename $F .mp3 | cut -d'-' -f2-25 | xargs -0)
GENRE='Pop'
YEAR=2020
mid3v2 -a "$ARTIST" -A "$ALBUM" -t "$SONG" -g $GENRE -y $YEAR $F
done
@icaoberg
icaoberg / README.md
Created June 3, 2021 19:15
README.md template

singularity-PACKAGE

Singularity recipe for PACKAGE.

Installing the container on Bridges 2

Copy the

  • SIF file
  • and the PACKAGE script

to /opt/packages/PACKAGE/VERSION.

@icaoberg
icaoberg / Singularity
Created June 3, 2021 02:31
Singularity recipe for spellcheck
Bootstrap: docker
From: debian:latest
%labels
AUTHOR icaoberg
MAINTAINER [email protected]
WEBSITE https://www.andrew.cmu.edu/~icaoberg
VERSION 0.5.0
%post
@icaoberg
icaoberg / Singularity
Created June 2, 2021 21:37
Singularity recipe for tokei
Bootstrap: docker
From: alpine:edge
%labels
AUTHOR icaoberg
MAINTAINER [email protected]
WEBSITE https://www.andrew.cmu.edu/~icaoberg
VERSION 12.1.2
%post
@icaoberg
icaoberg / Singularity
Last active June 2, 2021 21:26
Singularity recipe for hyperfine
Bootstrap: docker
From: alpine:edge
%labels
AUTHOR icaoberg
MAINTAINER [email protected]
WEBSITE https://www.andrew.cmu.edu/~icaoberg
VERSION 1.11.0
%post
@icaoberg
icaoberg / bioinformatics
Last active May 26, 2021 19:45
Simple script that lists modulefiles in the 'Biological Sciences' category
#!/bin/bash
module keywords "Biological Sciences"
@icaoberg
icaoberg / example.gnu
Created May 3, 2021 02:41
GNUplot example script
set terminal pngcairo transparent enhanced font "arial,10" fontscale 1.0 size 600, 400
set output 'image.png'
set key outside right top vertical Right noreverse enhanced autotitle nobox
set title "plot with filledcurve [options]"
set xrange [ * : * ] noreverse writeback
set x2range [ * : * ] noreverse writeback
set yrange [ * : * ] noreverse writeback
set y2range [ * : * ] noreverse writeback
set zrange [ * : * ] noreverse writeback
set cbrange [ * : * ] noreverse writeback