icaoberg
/ gist:2581526
Created
May 2, 2012 23:17
Retrieves a list of image ids (iids) owned by the user making the connection to an omero.server using the current API
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| # Author: Ivan E. Cao-Berg ([email protected]) | |
| # | |
| # Copyright (C) 2012 | |
| # School of Computer Science | |
| # Carnegie Mellon University | |
| # | |
| # This program is free software; you can redistribute it and/or modify | |
| # it under the terms of the GNU General Public License as published | |
| # by the Free Software Foundation; either version 2 of the License, | |
| # or (at your option) any later version. |
icaoberg
/ gist:2581913
Created
May 2, 2012 23:33
Retrieves a list of projects ids (prids) owned by the user making the connection to an omero.server using the current API
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| # Author: Ivan E. Cao-Berg ([email protected]) | |
| # | |
| # Copyright (C) 2012 | |
| # School of Computer Science | |
| # Carnegie Mellon University | |
| # | |
| # This program is free software; you can redistribute it and/or modify | |
| # it under the terms of the GNU General Public License as published | |
| # by the Free Software Foundation; either version 2 of the License, | |
| # or (at your option) any later version. |
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| # Author: Ivan E. Cao-Berg ([email protected]) | |
| # | |
| # Copyright (C) 2012-2025 | |
| # School of Computer Science | |
| # Carnegie Mellon University | |
| # | |
| # This program is free software; you can redistribute it and/or modify | |
| # it under the terms of the GNU General Public License as published | |
| # by the Free Software Foundation; either version 2 of the License, | |
| # or (at your option) any later version. |
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| # Author: Ivan E. Cao-Berg ([email protected]) | |
| # | |
| # Copyright (C) 2012-2025 | |
| # School of Computer Science | |
| # Carnegie Mellon University | |
| # | |
| # This program is free software; you can redistribute it and/or modify | |
| # it under the terms of the GNU General Public License as published | |
| # by the Free Software Foundation; either version 2 of the License, | |
| # or (at your option) any later version. |
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| # Author: Ivan E. Cao-Berg ([email protected]) | |
| # | |
| # Copyright (C) 2012-2025 | |
| # School of Computer Science | |
| # Carnegie Mellon University | |
| # | |
| # This program is free software; you can redistribute it and/or modify | |
| # it under the terms of the GNU General Public License as published | |
| # by the Free Software Foundation; either version 2 of the License, | |
| # or (at your option) any later version. |
icaoberg
/ img2features.py
Created
June 21, 2012 21:22
Shows how to calculate the SLF34 features subset using using pyslic
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| # Author: Ivan E. Cao-Berg ([email protected]) | |
| # | |
| # Copyright (C) 2012 Murphy Lab | |
| # Lane Center for Computational Biology | |
| # School of Computer Science | |
| # Carnegie Mellon University | |
| # | |
| # This program is free software; you can redistribute it and/or modify | |
| # it under the terms of the GNU General Public License as published | |
| # by the Free Software Foundation; either version 2 of the License, |
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| # Author: Michelle Mackie | |
| # Update: Ivan E. Cao-Berg | |
| # | |
| # Copyright (C) 2012-2025 | |
| # School of Computer Science | |
| # Carnegie Mellon University | |
| # | |
| # This program is free software; you can redistribute it and/or modify | |
| # it under the terms of the GNU General Public License as published | |
| # by the Free Software Foundation; either version 2 of the License, |
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| # Author: Michelle Mackie | |
| # Update: Ivan E. Cao-Berg | |
| # | |
| # Copyright (C) 2012-2025 | |
| # School of Computer Science | |
| # Carnegie Mellon University | |
| # | |
| # This program is free software; you can redistribute it and/or modify | |
| # it under the terms of the GNU General Public License as published | |
| # by the Free Software Foundation; either version 2 of the License, |
icaoberg
/ gist:3079133
Created
July 9, 2012 21:33
Train a generative model of subcellular location using the LAMP2 dataset from the Murphy Lab on CellOrganizer
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| function answer = lamp2( directory ) | |
| %LAMP2 Helper script that shows how to train a generative model of | |
| %subcelullar location using the LAMP2 dataset from the Murphy Lab. | |
| % Author: Ivan E. Cao-Berg ([email protected]) | |
| % | |
| % Copyright (C) 2012 Murphy Lab | |
| % Lane Center for Computational Biology | |
| % School of Computer Science | |
| % Carnegie Mellon University |
icaoberg
/ gitremovetag.sh
Created
August 10, 2012 17:37
Remove a tag from a Git repo and push the change to Github/BitBucket
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| #!/bin/bash | |
| # Author: Ivan E. Cao-Berg ([email protected]) | |
| # | |
| # Copyright (C) 2012 | |
| # School of Computer Science | |
| # Carnegie Mellon University | |
| # | |
| # This program is free software; you can redistribute it and/or modify | |
| # it under the terms of the GNU General Public License as published |
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